Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 37599963 . A C CCDS1790.1:NM_012413.3:c.1079cAt>cCt_NP_036545.1:p.360H>P Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4ywy 1 Q16769 99.45 0.0 X-RAY
 2015-08-05 HIS A:360 A:360 85.0 0.436 T 63.0 44.1 85.0 0.436 0.0 EDO
HOH
 9.799
2.929
 CB
O
 C1
O
HIS B:360 B:360 83.0 0.426 T 59.9 41.5 NA NA NA
HIS C:360 C:360 85.0 0.436 T 58.7 45.9 NA NA NA
2afm 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 89.0 0.456 T 63.5 45.6 89.0 0.456 0.0 HOH
 2.829
 CD2
 O
HIS B:328 B:360 99.0 0.508 T 59.9 46.9 NA NA NA
2afo 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 102.0 0.523 T 62.5 38.1 102.0 0.523 0.0 HOH
 3.234
 CD2
 O
HIS B:328 B:360 102.0 0.523 T 58.9 51.1 NA NA NA
2afw 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 92.0 0.472 T 62.6 45.0 92.0 0.472 0.0 HOH
 2.856
 CD2
 O
HIS B:328 B:360 104.0 0.533 T 59.9 48.1 NA NA NA
2afx 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 93.0 0.477 T 61.9 46.8 93.0 0.477 0.0 HOH
 2.782
 CD2
 O
HIS B:328 B:360 102.0 0.523 T 61.3 48.3 NA NA NA
2afz 1 Q16769 100.0 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 91.0 0.467 T 62.6 44.8 91.0 0.467 0.0 HOH
 2.819
 CD2
 O
HIS B:328 B:360 104.0 0.533 T 62.5 46.6 NA NA NA
3pbb 1 Q16769 100.0 0.0 X-RAY
 2011-02-02 HIS A:328 A:360 90.0 0.462 T 60.4 55.2 90.0 0.462 0.0 HOH
 2.920
 O
 O
HIS B:328 B:360 83.0 0.426 T 76.8 59.2 NA NA NA
2zef 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 87.0 0.446 T 62.0 43.0 87.0 0.446 0.0 HOH
 2.806
 CD2
 O
HIS B:328 B:360 101.0 0.518 T 59.5 48.1 NA NA NA
2zed 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 88.0 0.451 T 60.7 43.5 88.0 0.451 0.0 HOH
 2.769
 CD2
 O
HIS B:328 B:360 100.0 0.513 T 58.7 48.8 NA NA NA
2afu 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 104.0 0.533 T 58.8 42.7 104.0 0.533 0.0 HOH
 3.545
 O
 O
HIS B:328 B:360 101.0 0.518 T 59.9 51.2 NA NA NA
2zeh 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 87.0 0.446 T 64.0 43.4 87.0 0.446 0.0 HOH
 2.834
 CD2
 O
HIS B:328 B:360 95.0 0.487 T 60.9 50.4 NA NA NA
2zeo 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 87.0 0.446 T 62.3 46.2 87.0 0.446 0.0 HOH
 2.804
 CD2
 O
HIS B:328 B:360 103.0 0.528 T 61.9 48.9 NA NA NA
2zee 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 84.0 0.431 T 61.4 43.1 84.0 0.431 0.0 HOH
 2.891
 CD2
 O
HIS B:328 B:360 99.0 0.508 T 57.9 49.5 NA NA NA
3pbe 1 Q16769 99.7 0.0 X-RAY
 2011-02-02 HIS A:328 A:360 86.0 0.441 T 59.0 44.9 86.0 0.441 0.0 HOH
 2.810
 ND1
 O
HIS B:328 B:360 86.0 0.441 T 61.6 49.9 NA NA NA
2zem 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 86.0 0.441 T 61.9 40.5 86.0 0.441 0.0 HOH
 3.140
 CD2
 O
HIS B:328 B:360 95.0 0.487 T 55.8 53.8 NA NA NA
2zen 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 88.0 0.451 T 62.0 44.1 88.0 0.451 0.0 HOH
 2.956
 CD2
 O
HIS B:328 B:360 100.0 0.513 T 61.1 49.1 NA NA NA
2zel 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 86.0 0.441 T 63.0 41.7 86.0 0.441 0.0 HOH
 2.919
 CD2
 O
HIS B:328 B:360 100.0 0.513 T 58.2 48.2 NA NA NA
2zeg 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 85.0 0.436 T 64.8 43.5 85.0 0.436 0.0 HOH
 3.219
 CD2
 O
HIS B:328 B:360 96.0 0.492 T 57.8 50.0 NA NA NA
2zep 1 Q16769 99.7 0.0 X-RAY
 2008-04-22 HIS A:328 A:360 84.0 0.431 T 65.2 44.0 84.0 0.431 0.0 HOH
 2.965
 CD2
 O
HIS B:328 B:360 100.0 0.513 T 63.6 45.6 NA NA NA
7cm0 1 Q16769 100.0 0.0 X-RAY
 2021-12-22 HIS A:326 A:360 80.0 0.41 T 56.3 34.7 80.0 0.41 0.0 HOH
 7.860
 CE1
 O
HIS B:326 B:360 90.0 0.462 T 56.1 36.0 NA NA NA
HIS C:326 C:360 92.0 0.472 T 55.8 35.0 NA NA NA
HIS D:326 D:360 83.0 0.426 T 55.6 32.2 NA NA NA
2afs 1 Q16769 99.7 0.0 X-RAY
 2005-08-23 HIS A:328 A:360 85.0 0.436 T 61.0 42.1 85.0 0.436 0.0 HOH
 3.396
 C
 O
HIS B:328 B:360 101.0 0.518 T 56.8 49.9 NA NA NA
6yi1 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 HIS A:328 A:360 103.0 0.528 T 65.3 41.3 103.0 0.528 0.0 HOH
 3.008
 ND1
 O
HIS B:328 B:360 101.0 0.518 T 62.3 48.3 NA NA NA
6yjy 1 Q16769 100.0 0.0 X-RAY
 2020-07-01 HIS A:328 A:360 104.0 0.533 T 58.7 43.6 104.0 0.533 0.0 HOH
 2.805
 ND1
 O
HIS B:328 B:360 101.0 0.518 T 61.7 43.2 NA NA NA
4yu9 1 Q16769 99.39 0.0 X-RAY
 2015-08-05 HIS A:328 A:360 80.0 0.41 T 54.1 41.4 80.0 0.41 0.0 EDO
HOH
 9.819
2.767
 O
NE2
 O2
O
HIS B:328 B:360 83.0 0.426 T 55.0 44.8 NA NA NA
HIS C:328 C:360 83.0 0.426 T 64.2 39.8 NA NA NA
6gbx 1 Q16769 99.39 0.0 X-RAY
 2018-09-19 HIS A:328 A:360 76.0 0.39 T 62.3 46.1 76.0 0.39 0.0 EDO
HOH
 9.629
3.363
 O
C
 C2
O
HIS B:328 B:360 57.0 0.292 T 60.6 47.1 NA NA NA
HIS C:328 C:360 84.0 0.431 T 62.0 46.7 NA NA NA
7d8e 1 Q16769 99.39 0.0 X-RAY
 2021-12-08 HIS A:328 A:360 102.0 0.523 T 56.6 45.8 102.0 0.523 0.0 SO4
HOH
 4.452
3.177
 CE1
C
 O2
O
HIS B:328 B:360 102.0 0.523 T 58.5 45.0 NA NA NA
HIS C:328 C:360 102.0 0.523 T 58.4 47.7 NA NA NA
7coz 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 HIS A:326 A:360 82.0 0.421 T 63.7 43.8 82.0 0.421 0.0 EDO
HOH
 9.708
3.391
 CB
CA
 C2
O
HIS B:326 B:360 88.0 0.451 T 57.9 47.2 NA NA NA
HIS C:326 C:360 87.0 0.446 T 59.8 44.9 NA NA NA
7cp0 1 Q16769 99.39 0.0 X-RAY
 2021-01-13 HIS A:326 A:360 81.0 0.415 T 60.2 45.5 81.0 0.415 0.0 EDO
HOH
 9.185
3.339
 O
C
 O2
O
HIS B:326 B:360 82.0 0.421 T 61.8 45.6 NA NA NA
HIS C:326 C:360 84.0 0.431 T 60.6 40.7 NA NA NA
3si0 1 Q16769 100.0 0.0 X-RAY
 2011-06-29 HIS A:329 A:360 94.0 0.482 T 48.1 65.9 94.0 0.482 0.0 NAG
HOH
 9.862
4.339
 C
O
 C6
O
3si2 1 B2RX76 86.24 0.0 X-RAY
 2011-06-29 HIS A:326 A:361 92.0 0.472 T 61.6 46.9 92.0 0.472 0.0 NAG
NAG
HOH
 8.517
9.873
3.175
 O
O
C
 O6
C8
O
3si1 1 Q9CYK2 85.93 0.0 X-RAY
 2011-06-29 HIS A:326 A:361 124.0 0.636 -31.1 42.9 124.0 0.636 0.0 NAG
NAG
HOH
 7.640
9.199
3.102
 O
O
O
 O6
O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16769-f1 1 Q16769 100.0 0.0 HIS A:360 A:360 68.0 0.349 T 60.0 60.0