Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 70515234 . G A CCDS1903.1:NM_003096.2:c.146gCg>gTg_NP_003087.1:p.49A>V Homo sapiens small nuclear ribonucleoprotein polypeptide G (SNRPG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6v4x 5 P62308 100.0 1e-51 EM
 2020-02-19 ALA E:49 G:49 31.0 0.27 -75.4 179.3 31.0 0.27 0.0
4f7u 5 P62309 100.0 1e-51 X-RAY
 2013-01-30 ALA I:49 G:5049 22.0 0.191 -73.7 150.5 22.0 0.191 0.0 HOH
 4.279
 CA
 O
ALA J:49 J:5049 33.0 0.287 -78.1 151.1 NA NA NA
4pjo 7 P62308 100.0 1e-51 X-RAY
 2014-12-31 ALA G:49 G:49 22.0 0.191 -65.2 162.4 22.0 0.191 0.0
ALA R:49 g:49 24.0 0.209 -59.8 160.4 NA NA NA
ALA CA:49 U:49 52.0 0.452 -61.3 153.1 NA NA NA
ALA NA:49 u:49 25.0 0.217 -61.9 156.8 NA NA NA
4v98 8 P62308 100.0 1e-51 X-RAY
 2014-07-09 ALA H:49 AP:5044 29.0 0.252 -75.4 153.4 29.0 0.252 0.0
ALA P:49 AH:5044 30.0 0.261 -75.9 153.2 NA NA NA
ALA X:49 AX:5044 30.0 0.261 -75.6 153.6 NA NA NA
ALA FA:49 Af:5044 30.0 0.261 -76.0 153.3 NA NA NA
ALA NA:49 An:5044 31.0 0.27 -76.7 153.1 NA NA NA
ALA VA:49 Av:5044 29.0 0.252 -75.5 153.5 NA NA NA
ALA ZA:49 A4:5044 30.0 0.261 -76.1 153.0 NA NA NA
ALA LB:49 BH:5044 30.0 0.261 -76.9 153.1 NA NA NA
ALA TB:49 BP:5044 29.0 0.252 -76.6 153.2 NA NA NA
ALA BC:49 BX:5044 29.0 0.252 -76.6 153.2 NA NA NA
ALA JC:49 Bf:5044 29.0 0.252 -76.0 153.3 NA NA NA
ALA RC:49 Bn:5044 29.0 0.252 -77.1 153.1 NA NA NA
ALA ZC:49 Bv:5044 28.0 0.243 -76.1 153.0 NA NA NA
ALA DD:49 B4:5044 28.0 0.243 -75.9 153.2 NA NA NA
ALA PD:49 CH:5044 28.0 0.243 -74.5 153.6 NA NA NA
ALA XD:49 CP:5044 29.0 0.252 -75.9 153.2 NA NA NA
ALA FE:49 CX:5044 30.0 0.261 -74.9 154.0 NA NA NA
ALA NE:49 Cf:5044 29.0 0.252 -74.4 153.8 NA NA NA
ALA VE:49 Cn:5044 31.0 0.27 -76.7 153.4 NA NA NA
ALA DF:49 Cv:5044 28.0 0.243 -76.8 153.0 NA NA NA
4wzj 7 P62308 100.0 1e-51 X-RAY
 2015-01-14 ALA G:49 G:49 22.0 0.191 -64.7 149.5 22.0 0.191 0.0
ALA N:49 N:49 23.0 0.2 -64.2 149.6 NA NA NA
ALA U:49 U:49 22.0 0.191 -64.2 149.2 NA NA NA
ALA BA:49 GG:49 22.0 0.191 -63.8 149.9 NA NA NA
ALA IA:49 NN:49 23.0 0.2 -63.6 149.0 NA NA NA
ALA PA:49 UU:49 23.0 0.2 -64.2 149.6 NA NA NA
ALA WA:49 GGG:49 23.0 0.2 -64.2 149.8 NA NA NA
ALA DB:49 NNN:49 24.0 0.209 -65.4 149.5 NA NA NA
ALA KB:49 UUU:49 24.0 0.209 -63.9 149.1 NA NA NA
ALA RB:49 GGGG:49 23.0 0.2 -64.1 149.2 NA NA NA
ALA YB:49 NNNN:49 22.0 0.191 -63.6 149.8 NA NA NA
ALA FC:49 UUUU:49 22.0 0.191 -64.4 149.8 NA NA NA
5mqf 25 P62308 100.0 1e-51 EM
 2017-03-22 ALA BA:49 d:49 51.0 0.443 -78.5 155.7 51.0 0.443 0.0
ALA IA:49 k:49 51.0 0.443 -64.3 149.9 51.0 0.443 0.0 G
C
 5.727
6.654
 C
C
 O2'
C5'
5o9z 22 P62308 100.0 1e-51 EM
 2017-08-16 ALA V:49 d:49 58.0 0.504 S -124.6 136.9 58.0 0.504 0.0 G
C
 8.712
8.796
 C
C
 OP1
OP1
ALA CA:49 k:49 59.0 0.513 S -120.9 130.6 59.0 0.513 0.0 C
G
A
 8.676
8.745
7.978
 C
C
CB
 O2'
N2
O2'
ALA WA:49 V:49 NA NA NA NA NA NA NA NA G
C
 6.946
7.339
 CA
CA
 O2'
C5'
5xjc 33 P62308 100.0 1e-51 EM
 2017-07-05 ALA GA:49 g:49 23.0 0.2 -64.6 149.6 23.0 0.2 0.0
ALA NA:49 NA:NA DO NA DO DO DO DO DO DO
5xjl 6 P62308 100.0 1e-51 X-RAY
 2018-05-02 ALA F:49 G:49 51.0 0.443 -59.2 -113.1 51.0 0.443 0.0
5xjq 6 P62308 100.0 1e-51 X-RAY
 2018-07-04 ALA F:49 G:49 152.0 1.0 -79.1 360.0 152.0 1.0 0.0
5xjr 6 P62308 100.0 1e-51 X-RAY
 2018-07-04 ALA F:49 G:49 91.0 0.791 -42.2 360.0 91.0 0.791 0.0
5xjt 6 P62308 100.0 1e-51 X-RAY
 2018-07-04 ALA F:49 G:49 33.0 0.287 -81.2 173.9 33.0 0.287 0.0
5xju 6 P62308 100.0 1e-51 X-RAY
 2018-07-04 ALA F:49 G:49 100.0 0.87 -62.1 360.0 100.0 0.87 0.0
5yzg 39 P62308 100.0 1e-51 EM
 2018-08-08 ALA PA:49 NA:NA DO NA DO DO DO NA NA NA
ALA YA:49 g:49 23.0 0.2 -64.6 149.5 23.0 0.2 0.0
5z56 12 P62308 100.0 1e-51 EM
 2018-09-19 ALA L:49 g:49 51.0 0.443 -64.6 149.6 51.0 0.443 0.0
ALA V:49 NA:NA DO NA DO DO DO NA NA NA
5z57 12 P62308 100.0 1e-51 EM
 2018-09-19 ALA L:49 g:49 51.0 0.443 -64.6 149.6 51.0 0.443 0.0
ALA V:49 NA:NA DO NA DO DO DO NA NA NA
5z58 12 P62308 100.0 1e-51 EM
 2018-09-19 ALA L:49 g:49 51.0 0.443 -64.6 149.6 51.0 0.443 0.0
ALA V:49 NA:NA DO NA DO DO DO NA NA NA
6ah0 7 P62308 100.0 1e-51 EM
 2018-11-14 ALA G:49 d:49 51.0 NA S -124.6 136.9 51.0 NA NA G
C
U
 7.707
7.189
9.644
 C
C
C
 OP1
OP1
OP2
ALA CA:49 NA:NA DO NA DO DO DO NA NA NA
ALA YA:49 S:49 53.0 NA S -120.9 130.5 53.0 NA NA G
A
 9.471
9.114
 CA
CA
 O2'
O2'
6ahd 18 P62308 100.0 1e-51 EM
 2018-11-14 ALA R:49 f:49 40.0 NA -64.6 149.5 40.0 NA NA G
G
 8.308
7.630
 C
C
 OP1
OP1
ALA IA:49 NA:NA DO NA DO DO DO NA NA NA
ALA YA:49 S:49 49.0 NA S -120.9 130.5 49.0 NA NA G
A
G
 9.955
8.003
9.721
 CA
CA
CA
 O2'
O2'
C5'
6ff7 42 P62308 100.0 1e-51 EM
 2019-03-13 ALA SA:49 d:49 64.0 0.557 E -115.1 140.4 64.0 0.557 0.0
ALA ZA:49 k:49 51.0 0.443 -64.2 149.9 51.0 0.443 0.0
6icz 35 P62308 100.0 1e-51 EM
 2019-03-13 ALA IA:49 NA:NA DO NA DO DO DO NA NA NA
ALA SA:49 g:49 51.0 0.443 -64.6 149.4 51.0 0.443 0.0
6id0 26 P62308 100.0 1e-51 EM
 2019-03-13 ALA Z:49 g:49 51.0 0.443 -64.5 149.4 51.0 0.443 0.0
ALA LA:49 NA:NA DO NA DO DO DO NA NA NA
6id1 25 P62308 100.0 1e-51 EM
 2019-03-13 ALA Y:49 g:49 52.0 0.452 -64.6 149.5 52.0 0.452 0.0
ALA NA:49 NA:NA DO NA DO DO DO DO DO DO
6qw6 13 P62308 100.0 1e-51 EM
 2019-04-17 ALA M:49 4g:49 32.0 0.278 -77.0 178.4 32.0 0.278 0.0
ALA BA:49 5g:49 32.0 0.278 -77.0 178.3 32.0 0.278 0.0
6qx9 34 P62308 100.0 1e-51 EM
 2019-04-17 ALA QA:49 1g:49 24.0 0.209 -61.9 156.8 24.0 0.209 0.0
ALA ZA:49 2g:49 46.0 0.4 -90.1 -168.2 46.0 0.4 0.0
ALA HB:49 5g:49 32.0 0.278 -76.9 178.3 32.0 0.278 0.0
ALA MB:49 4g:49 32.0 0.278 -77.0 178.4 32.0 0.278 0.0
6y53 10 P62308 100.0 1e-51 EM
 2020-06-17 ALA J:49 k:49 50.0 NA -85.5 -173.1 50.0 NA NA U
G
C
 9.861
5.827
7.501
 O
O
C
 O2'
O2'
C5'
6y5q 15 P62308 100.0 1e-51 EM
 2020-06-17 ALA O:49 k:49 50.0 NA -85.5 -173.1 50.0 NA NA U
G
C
 9.861
5.827
7.501
 O
O
C
 O2'
O2'
C5'
7a5p 27 P62308 100.0 1e-51 EM
 2020-10-14 ALA DA:49 g:49 53.0 0.461 -65.5 152.7 53.0 0.461 0.0
ALA HA:49 k:49 52.0 0.452 -66.1 152.6 52.0 0.452 0.0
7abg 47 P62308 100.0 1e-51 EM
 2020-12-23 ALA UA:49 k:49 76.0 0.661 -90.1 -168.2 76.0 0.661 0.0 G
C
 7.270
8.995
 C
C
 O2'
C5'
ALA DB:49 d:49 58.0 0.504 S -125.3 137.8 58.0 0.504 0.0
7abi 6 P62308 100.0 1e-51 EM
 2021-02-10 ALA F:49 d:49 59.0 0.513 -126.2 126.2 59.0 0.513 0.0
ALA NA:49 k:49 76.0 0.661 -90.1 -168.2 76.0 0.661 0.0 G
C
 7.260
8.977
 C
C
 O2'
C5'
7b0y 22 P62308 100.0 1e-51 EM
 2021-01-13 ALA V:49 h:49 49.0 0.426 -70.9 179.3 39.0 0.339 0.087 U:P62304:0.087
7dvq 12 P62308 100.0 1e-51 EM
 2021-03-31 ALA L:49 g:49 50.0 0.435 -64.5 149.5 50.0 0.435 0.0
ALA V:49 NA:NA DO NA DO DO DO NA NA NA
6qdv 36 P62308 100.0 2e-49 EM
 2019-02-20 ALA JA:46 g:49 47.0 0.409 -74.4 178.8 42.0 0.365 0.044 HA:P62304:0.043
ALA UA:46 r:49 46.0 0.4 -90.1 -168.2 46.0 0.4 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p62308-f1 1 P62308 100.0 6e-52 ALA A:49 A:49 25.0 0.217 -66.9 150.9
af-a8mwd9-f1 1 A8MWD9 94.74 8e-49 ALA A:49 A:49 38.0 0.33 -68.8 148.3