Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 1629700 | . | C | A | CCDS13020.2:NM_018556.3:c.428gGt>gTt_NP_061026.2:p.143G>V | Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4i2x | 3 | Q9P1W8 | 99.69 | 0.0 |
X-RAY |
2013-12-18 | GLY | E:115 | E:115 | 6.0 | 0.08 | -116.9 | 178.3 | 6.0 | 0.08 | 0.0 |
HOH |
2.718 |
O |
O |
|||
| GLY | F:115 | F:115 | 10.0 | 0.133 | -114.4 | -176.4 | NA | NA | NA | ||||||||||||||
| 2jjw | 1 | Q9P1W8 | 100.0 | 2e-82 |
X-RAY |
2008-08-05 | GLY | A:115 | A:115 | 21.0 | 0.28 | -127.0 | 168.0 | 18.0 | 0.24 | 0.04 |
A:Q9P1W8:0.04 |
HOH |
2.837 |
O |
O |
||
| 2jjv | 1 | Q5TFQ8 | 81.51 | 9e-69 |
X-RAY |
2008-08-05 | ARG | A:115 | A:115 | 185.0 | 0.822 | -68.2 | 360.0 | 185.0 | 0.822 | 0.0 |
HOH |
3.118 |
NH1 |
O |
|||
| ARG | B:115 | B:115 | 153.0 | 0.68 | -120.4 | 127.9 | NA | NA | NA | ||||||||||||||
| 6nmr | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | ARG | C:115 | S:115 | 210.0 | 0.933 | -145.5 | 360.0 | 210.0 | 0.933 | 0.0 |
HOH |
8.640 |
O |
O |
|||
| ARG | F:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| ARG | I:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| ARG | L:115 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 6nms | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | ARG | C:115 | S:115 | 174.0 | 0.773 | 64.5 | 100.1 | 172.0 | 0.764 | 0.009 |
B:None:0.009 |
HOH |
2.330 |
NH2 |
O |
||
| ARG | F:115 | C:115 | 161.0 | 0.716 | E | -111.3 | 165.3 | NA | NA | NA | |||||||||||||
| 6nmt | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | ARG | C:115 | C:115 | 195.0 | 0.867 | -101.9 | 360.0 | 184.0 | 0.818 | 0.049 |
B:None:0.049 |
HOH |
4.242 |
NH1 |
O |
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| 6nmu | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | ARG | C:115 | S:115 | 148.0 | 0.658 | E | -77.5 | 152.3 | 148.0 | 0.658 | 0.0 |
HOH |
2.985 |
NH2 |
O |
||
| ARG | F:115 | C:115 | 159.0 | 0.707 | -61.2 | 179.5 | NA | NA | NA | ||||||||||||||
| 6nmv | 1 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | ARG | A:115 | S:115 | 107.0 | 0.476 | E | -78.0 | 111.1 | 107.0 | 0.476 | 0.0 |
HOH |
4.877 |
O |
O |
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| 4cmm | 1 | P78324 | 80.67 | 1e-67 |
X-RAY |
2014-02-26 | ARG | A:115 | A:115 | 123.0 | 0.547 | E | -123.3 | 155.7 | 123.0 | 0.547 | 0.0 |
HOH |
3.429 |
NH2 |
O |
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| 6bit | 3 | P78324 | 80.34 | 3e-66 |
X-RAY |
2017-12-06 | ARG | C:115 | H:115 | 163.0 | 0.724 | E | -92.7 | 118.9 | 163.0 | 0.724 | 0.0 |
HOH |
5.203 |
O |
O |
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| ARG | F:115 | G:115 | 136.0 | 0.604 | E | -92.5 | 97.7 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9p1w8-f1 | 1 | Q9P1W8 | 100.0 | 0.0 | GLY | A:143 | A:143 | 8.0 | 0.107 | -99.0 | 157.2 | ||
| af-p78324-f1 | 1 | P78324 | 81.02 | 0.0 | ARG | A:145 | A:145 | 100.0 | 0.444 | E | -96.8 | 124.1 | |