Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 1629805 . C A CCDS13020.2:NM_018556.3:c.323aGc>aTc_NP_061026.2:p.108S>I Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4i2x 3 Q9P1W8 99.69 0.0 X-RAY
 2013-12-18 SER E:80 E:80 71.0 0.617 S 61.9 50.1 71.0 0.617 0.0 HOH
 2.883
 N
 O
SER F:80 F:80 74.0 0.643 S 49.7 52.0 NA NA NA
2jjw 1 Q9P1W8 100.0 2e-82 X-RAY
 2008-08-05 SER A:80 A:80 71.0 0.617 S 58.8 51.3 71.0 0.617 0.0 HOH
 2.615
 N
 O
2jjv 1 Q5TFQ8 81.51 9e-69 X-RAY
 2008-08-05 ASN A:80 A:80 99.0 0.619 S 53.8 58.4 99.0 0.619 0.0 HOH
 2.781
 N
 O
ASN B:80 B:80 100.0 0.625 S 50.3 64.9 NA NA NA
6nmr 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 ALA C:80 S:80 59.0 0.513 S 43.6 66.2 59.0 0.513 0.0 HOH
 4.826
 N
 O
ALA F:80 E:80 62.0 0.539 S 37.1 71.6 NA NA NA
ALA I:80 I:80 37.0 0.322 S -131.9 102.1 NA NA NA
ALA L:80 M:80 65.0 0.565 S 37.5 75.6 NA NA NA
6nms 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 ALA C:80 S:80 65.0 0.565 S 50.7 56.6 65.0 0.565 0.0 HOH
 4.618
 O
 O
ALA F:80 C:80 63.0 0.548 S 50.8 58.5 NA NA NA
6nmt 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 ALA C:80 C:80 59.0 0.513 S 55.6 53.8 59.0 0.513 0.0 HOH
 2.461
 N
 O
6nmu 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 ALA C:80 S:80 55.0 0.478 S 52.7 66.2 44.0 0.383 0.095 A:None:0.096
 HOH
 6.052
 CB
 O
ALA F:80 C:80 55.0 0.478 S 57.1 62.4 NA NA NA
6nmv 1 P78324 80.67 7e-68 X-RAY
 2019-08-07 ALA A:80 S:80 67.0 0.583 S 55.8 48.9 67.0 0.583 0.0 HOH
 7.394
 N
 O
4cmm 1 P78324 80.67 1e-67 X-RAY
 2014-02-26 ASN A:80 A:80 102.0 0.637 S 47.9 58.7 102.0 0.637 0.0 HOH
 3.007
 N
 O
6bit 3 P78324 80.34 3e-66 X-RAY
 2017-12-06 ASN C:80 H:80 125.0 0.781 S 51.4 65.5 125.0 0.781 0.0 HOH
 2.889
 N
 O
ASN F:80 G:80 120.0 0.75 S 53.8 64.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9p1w8-f1 1 Q9P1W8 100.0 0.0 SER A:108 A:108 73.0 0.635 S 54.4 58.9
af-p78324-f1 1 P78324 81.02 0.0 ASN A:110 A:110 106.0 0.662 S 52.1 59.5