Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 1629862 | . | G | A | CCDS13020.2:NM_018556.3:c.266aCa>aTa_NP_061026.2:p.89T>I | Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4i2x | 3 | Q9P1W8 | 99.69 | 0.0 |
X-RAY |
2013-12-18 | THR | E:61 | E:61 | 77.0 | 0.55 | E | -145.9 | 131.1 | 77.0 | 0.55 | 0.0 |
HOH |
3.852 |
OG1 |
O |
||
| THR | F:61 | F:61 | 76.0 | 0.543 | E | -122.8 | 127.5 | NA | NA | NA | |||||||||||||
| 2jjw | 1 | Q9P1W8 | 100.0 | 2e-82 |
X-RAY |
2008-08-05 | THR | A:61 | A:61 | 79.0 | 0.564 | E | -129.7 | 155.4 | 79.0 | 0.564 | 0.0 |
HOH |
3.380 |
OG1 |
O |
||
| 2jjv | 1 | Q5TFQ8 | 81.51 | 9e-69 |
X-RAY |
2008-08-05 | THR | A:61 | A:61 | 76.0 | 0.543 | E | -139.5 | 160.1 | 76.0 | 0.543 | 0.0 |
HOH |
2.876 |
OG1 |
O |
||
| THR | B:61 | B:61 | 72.0 | 0.514 | E | -123.4 | 132.6 | NA | NA | NA | |||||||||||||
| 6nmr | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:61 | S:61 | 69.0 | 0.493 | E | -127.9 | 143.1 | 69.0 | 0.493 | 0.0 |
HOH |
4.527 |
OG1 |
O |
||
| THR | F:61 | E:61 | 64.0 | 0.457 | E | -131.7 | 140.6 | NA | NA | NA | |||||||||||||
| THR | I:61 | I:61 | 76.0 | 0.543 | E | -135.5 | 143.6 | NA | NA | NA | |||||||||||||
| THR | L:61 | M:61 | 66.0 | 0.471 | E | -128.1 | 146.3 | NA | NA | NA | |||||||||||||
| 6nms | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:61 | S:61 | 82.0 | 0.586 | E | -126.6 | 133.7 | 82.0 | 0.586 | 0.0 |
HOH |
2.904 |
OG1 |
O |
||
| THR | F:61 | C:61 | 83.0 | 0.593 | E | -127.6 | 131.9 | NA | NA | NA | |||||||||||||
| 6nmt | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:61 | C:61 | 83.0 | 0.593 | E | -121.0 | 147.9 | 83.0 | 0.593 | 0.0 |
HOH |
3.000 |
OG1 |
O |
||
| 6nmu | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:61 | S:61 | 83.0 | 0.593 | E | -118.5 | 147.6 | 83.0 | 0.593 | 0.0 |
HOH |
4.596 |
CA |
O |
||
| THR | F:61 | C:61 | 78.0 | 0.557 | E | -119.1 | 149.8 | NA | NA | NA | |||||||||||||
| 6nmv | 1 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | A:61 | S:61 | 91.0 | 0.65 | E | -81.4 | 166.4 | 91.0 | 0.65 | 0.0 |
HOH |
9.689 |
C |
O |
||
| 4cmm | 1 | P78324 | 80.67 | 1e-67 |
X-RAY |
2014-02-26 | THR | A:61 | A:61 | 82.0 | 0.586 | E | -128.3 | 158.0 | 82.0 | 0.586 | 0.0 |
HOH |
2.883 |
OG1 |
O |
||
| 6bit | 3 | P78324 | 80.34 | 3e-66 |
X-RAY |
2017-12-06 | THR | C:61 | H:61 | 81.0 | 0.579 | E | -128.4 | 142.9 | 81.0 | 0.579 | 0.0 |
HOH |
3.499 |
CA |
O |
||
| THR | F:61 | G:61 | 76.0 | 0.543 | E | -128.2 | 149.1 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9p1w8-f1 | 1 | Q9P1W8 | 100.0 | 0.0 | THR | A:89 | A:89 | 76.0 | 0.543 | E | -126.3 | 152.5 | |
| af-p78324-f1 | 1 | P78324 | 81.02 | 0.0 | THR | A:91 | A:91 | 82.0 | 0.586 | E | -128.9 | 152.5 | |