Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 1629931 | . | C | A | CCDS13020.2:NM_018556.3:c.197tGg>tTg_NP_061026.2:p.66W>L | Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4i2x | 3 | Q9P1W8 | 99.69 | 0.0 |
X-RAY |
2013-12-18 | TRP | E:38 | E:38 | 2.0 | 0.008 | E | -113.0 | 141.4 | 2.0 | 0.008 | 0.0 |
HOH |
5.880 |
CH2 |
O |
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| TRP | F:38 | F:38 | 2.0 | 0.008 | E | -111.7 | 131.7 | NA | NA | NA | |||||||||||||
| 2jjw | 1 | Q9P1W8 | 100.0 | 2e-82 |
X-RAY |
2008-08-05 | TRP | A:38 | A:38 | 2.0 | 0.008 | E | -109.9 | 136.0 | 2.0 | 0.008 | 0.0 |
HOH |
3.285 |
CH2 |
O |
||
| 2jjv | 1 | Q5TFQ8 | 81.51 | 9e-69 |
X-RAY |
2008-08-05 | TRP | A:38 | A:38 | 0.0 | 0.0 | E | -106.2 | 135.1 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
7.673 5.451 |
O CH2 |
O1 O |
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| TRP | B:38 | B:38 | 0.0 | 0.0 | E | -112.5 | 142.0 | NA | NA | NA | |||||||||||||
| 6nmr | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | TRP | C:38 | S:38 | 3.0 | 0.012 | E | -112.2 | 132.5 | 0.0 | 0.0 | 0.012 |
B:None:0.012 |
HOH |
7.942 |
O |
O |
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| TRP | F:38 | E:38 | 4.0 | 0.016 | E | -114.2 | 130.1 | NA | NA | NA | |||||||||||||
| TRP | I:38 | I:38 | 2.0 | 0.008 | E | -114.2 | 131.8 | NA | NA | NA | |||||||||||||
| TRP | L:38 | M:38 | 3.0 | 0.012 | E | -114.5 | 134.6 | NA | NA | NA | |||||||||||||
| 6nms | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | TRP | C:38 | S:38 | 1.0 | 0.004 | E | -112.2 | 131.4 | 1.0 | 0.004 | 0.0 |
HOH |
5.377 |
CH2 |
O |
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| TRP | F:38 | C:38 | 1.0 | 0.004 | E | -110.9 | 133.6 | NA | NA | NA | |||||||||||||
| 6nmt | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | TRP | C:38 | C:38 | 1.0 | 0.004 | E | -111.3 | 138.3 | 1.0 | 0.004 | 0.0 |
HOH |
5.516 |
CH2 |
O |
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| 6nmu | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | TRP | C:38 | S:38 | 0.0 | 0.0 | E | -112.1 | 135.5 | 0.0 | 0.0 | 0.0 |
HOH |
6.605 |
C |
O |
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| TRP | F:38 | C:38 | 1.0 | 0.004 | E | -104.9 | 141.4 | NA | NA | NA | |||||||||||||
| 6nmv | 1 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | TRP | A:38 | S:38 | 0.0 | 0.0 | E | -99.5 | 134.0 | 0.0 | 0.0 | 0.0 |
HOH |
5.236 |
CH2 |
O |
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| 4cmm | 1 | P78324 | 80.67 | 1e-67 |
X-RAY |
2014-02-26 | TRP | A:38 | A:38 | 2.0 | 0.008 | E | -103.8 | 139.5 | 2.0 | 0.008 | 0.0 |
HOH |
3.535 |
CD1 |
O |
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| 6bit | 3 | P78324 | 80.34 | 3e-66 |
X-RAY |
2017-12-06 | TRP | C:38 | H:38 | 1.0 | 0.004 | E | -107.6 | 133.9 | 1.0 | 0.004 | 0.0 |
HOH |
5.491 |
CH2 |
O |
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| TRP | F:38 | G:38 | 0.0 | 0.0 | E | -116.0 | 137.5 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9p1w8-f1 | 1 | Q9P1W8 | 100.0 | 0.0 | TRP | A:66 | A:66 | 2.0 | 0.008 | E | -108.6 | 134.7 | |
| af-p78324-f1 | 1 | P78324 | 81.02 | 0.0 | TRP | A:68 | A:68 | 1.0 | 0.004 | E | -107.2 | 132.4 | |