Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 1629947 . C A CCDS13020.2:NM_018556.3:c.181Gtg>Ttg_NP_061026.2:p.61V>L Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4i2x 3 Q9P1W8 99.69 0.0 X-RAY
 2013-12-18 VAL E:33 E:33 108.0 0.697 -65.8 151.1 108.0 0.697 0.0 HOH
 4.007
 CA
 O
VAL F:33 F:33 112.0 0.723 -65.4 139.9 NA NA NA
2jjw 1 Q9P1W8 100.0 2e-82 X-RAY
 2008-08-05 VAL A:33 A:33 119.0 0.768 -74.7 135.5 119.0 0.768 0.0 HOH
 3.105
 CG1
 O
2jjv 1 Q5TFQ8 81.51 9e-69 X-RAY
 2008-08-05 VAL A:33 A:33 91.0 0.587 -69.4 139.5 91.0 0.587 0.0
VAL B:33 B:33 85.0 0.548 -65.7 144.8 NA NA NA
6nmr 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 VAL C:33 S:33 93.0 0.6 -65.2 135.8 10.0 0.065 0.535 B:None:0.503
A:None:0.142
 HOH
 3.772
 CG2
 O
VAL F:33 E:33 91.0 0.587 -67.8 135.7 NA NA NA
VAL I:33 I:33 85.0 0.548 -65.3 133.8 NA NA NA
VAL L:33 M:33 94.0 0.606 -65.0 134.7 NA NA NA
6nms 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 VAL C:33 S:33 77.0 0.497 -68.3 138.4 77.0 0.497 0.0
VAL F:33 C:33 85.0 0.548 -70.4 143.3 NA NA NA
6nmt 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 VAL C:33 C:33 93.0 0.6 -67.6 149.1 93.0 0.6 0.0 HOH
 2.734
 O
 O
6nmu 3 P78324 80.67 7e-68 X-RAY
 2019-08-07 VAL C:33 S:33 98.0 0.632 -75.5 154.5 98.0 0.632 0.0 HOH
 3.326
 CA
 O
VAL F:33 C:33 82.0 0.529 -73.7 148.4 NA NA NA
6nmv 1 P78324 80.67 7e-68 X-RAY
 2019-08-07 VAL A:33 S:33 92.0 0.594 -66.1 145.1 92.0 0.594 0.0
4cmm 1 P78324 80.67 1e-67 X-RAY
 2014-02-26 VAL A:33 A:33 117.0 0.755 S -58.5 129.7 25.0 0.161 0.594 B:Q08722:0.594
 HOH
 2.636
 O
 O
6bit 3 P78324 80.34 3e-66 X-RAY
 2017-12-06 VAL C:33 H:33 100.0 0.645 -71.2 147.6 90.0 0.581 0.064 A:None:0.065
 HOH
 2.559
 O
 O
VAL F:33 G:33 118.0 0.761 -71.0 135.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9p1w8-f1 1 Q9P1W8 100.0 0.0 VAL A:61 A:61 87.0 0.561 -66.6 129.2
af-p78324-f1 1 P78324 81.02 0.0 VAL A:63 A:63 107.0 0.69 -60.3 132.9