Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 1629967 | . | G | A | CCDS13020.2:NM_018556.3:c.161aCt>aTt_NP_061026.2:p.54T>I | Homo sapiens signal regulatory protein gamma (SIRPG), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4i2x | 3 | Q9P1W8 | 99.69 | 0.0 |
X-RAY |
2013-12-18 | THR | E:26 | E:26 | 48.0 | 0.343 | E | -130.6 | 150.7 | 0.0 | 0.0 | 0.343 |
B:None:0.343 |
HOH |
7.260 |
N |
O |
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| THR | F:26 | F:26 | 52.0 | 0.371 | E | -135.7 | 168.4 | NA | NA | NA | |||||||||||||
| 2jjw | 1 | Q9P1W8 | 100.0 | 2e-82 |
X-RAY |
2008-08-05 | THR | A:26 | A:26 | 56.0 | 0.4 | E | -128.3 | 145.8 | 56.0 | 0.4 | 0.0 |
HOH |
2.739 |
OG1 |
O |
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| 2jjv | 1 | Q5TFQ8 | 81.51 | 9e-69 |
X-RAY |
2008-08-05 | THR | A:26 | A:26 | 55.0 | 0.393 | E | -131.8 | 144.4 | 55.0 | 0.393 | 0.0 |
HOH |
6.736 |
O |
O |
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| THR | B:26 | B:26 | 51.0 | 0.364 | E | -126.0 | 120.2 | NA | NA | NA | |||||||||||||
| 6nmr | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:26 | S:26 | 51.0 | 0.364 | E | -137.5 | 134.3 | 51.0 | 0.364 | 0.0 |
HOH |
3.857 |
CG2 |
O |
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| THR | F:26 | E:26 | 51.0 | 0.364 | E | -138.4 | 133.4 | NA | NA | NA | |||||||||||||
| THR | I:26 | I:26 | 58.0 | 0.414 | E | -140.5 | 135.1 | NA | NA | NA | |||||||||||||
| THR | L:26 | M:26 | 53.0 | 0.379 | E | -135.4 | 134.6 | NA | NA | NA | |||||||||||||
| 6nms | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:26 | S:26 | 53.0 | 0.379 | E | -137.3 | 137.4 | 53.0 | 0.379 | 0.0 |
HOH |
6.655 |
O |
O |
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| THR | F:26 | C:26 | 56.0 | 0.4 | E | -134.9 | 138.0 | NA | NA | NA | |||||||||||||
| 6nmt | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:26 | C:26 | 60.0 | 0.429 | E | -129.5 | 135.7 | 29.0 | 0.207 | 0.222 |
A:None:0.221 |
HOH |
2.248 |
OG1 |
O |
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| 6nmu | 3 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | C:26 | S:26 | 57.0 | 0.407 | E | -131.6 | 134.5 | 57.0 | 0.407 | 0.0 |
HOH |
6.915 |
O |
O |
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| THR | F:26 | C:26 | 59.0 | 0.421 | E | -146.1 | 137.2 | NA | NA | NA | |||||||||||||
| 6nmv | 1 | P78324 | 80.67 | 7e-68 |
X-RAY |
2019-08-07 | THR | A:26 | S:26 | 45.0 | 0.321 | E | -137.9 | 136.1 | 45.0 | 0.321 | 0.0 |
HOH |
8.434 |
N |
O |
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| 4cmm | 1 | P78324 | 80.67 | 1e-67 |
X-RAY |
2014-02-26 | THR | A:26 | A:26 | 60.0 | 0.429 | E | -139.1 | 139.2 | 60.0 | 0.429 | 0.0 |
HOH |
6.638 |
CG2 |
O |
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| 6bit | 3 | P78324 | 80.34 | 3e-66 |
X-RAY |
2017-12-06 | THR | C:26 | H:26 | 56.0 | 0.4 | E | -131.8 | 139.0 | 56.0 | 0.4 | 0.0 |
HOH |
3.308 |
CG2 |
O |
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| THR | F:26 | G:26 | 64.0 | 0.457 | E | -141.4 | 135.8 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9p1w8-f1 | 1 | Q9P1W8 | 100.0 | 0.0 | THR | A:54 | A:54 | 52.0 | 0.371 | E | -131.0 | 157.1 | |
| af-p78324-f1 | 1 | P78324 | 81.02 | 0.0 | THR | A:56 | A:56 | 54.0 | 0.386 | E | -129.9 | 154.7 | |