Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 1895889 . G A CCDS13022.1:NM_001040022.1:c.224gGc>gAc_NP_001035111.1:p.75G>D Homo sapiens signal regulatory protein alpha (SIRPA), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2wng 1 P78324 95.94 0.0 X-RAY
 2009-07-21 ALA A:45 A:45 108.0 0.939 T 54.5 52.6 108.0 0.939 0.0 HOH
 9.646
 O
 O
4i2x 3 Q9P1W8 82.19 0.0 X-RAY
 2013-12-18 GLY E:45 E:45 76.0 1.0 T -87.5 3.9 76.0 1.0 0.0 HOH
 7.623
 N
 O
GLY F:45 F:45 74.0 0.987 T -83.0 10.1 NA NA NA
4cmm 1 P78324 100.0 6e-82 X-RAY
 2014-02-26 GLY A:45 A:45 65.0 0.867 T -96.4 18.9 65.0 0.867 0.0 HOH
 5.741
 C
 O
6nmr 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 GLY C:45 S:45 83.0 1.0 T -98.4 48.3 83.0 1.0 0.0 HOH
 6.449
 O
 O
GLY F:45 E:45 83.0 1.0 S 126.1 49.5 NA NA NA
GLY I:45 I:45 68.0 0.907 T -72.6 56.6 NA NA NA
GLY L:45 M:45 77.0 1.0 T -82.1 25.5 NA NA NA
6nms 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 GLY C:45 S:45 76.0 1.0 T -88.5 30.6 76.0 1.0 0.0 HOH
 6.461
 C
 O
GLY F:45 C:45 71.0 0.947 T -89.4 36.3 NA NA NA
6nmt 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 GLY C:45 C:45 76.0 1.0 T -82.6 9.4 76.0 1.0 0.0 HOH
 6.616
 C
 O
6nmu 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 GLY C:45 S:45 63.0 0.84 T -82.5 5.3 43.0 0.573 0.267 B:None:0.267
 HOH
 2.635
 N
 O
GLY F:45 C:45 65.0 0.867 T -72.9 -5.1 NA NA NA
6nmv 1 P78324 99.16 7e-81 X-RAY
 2019-08-07 GLY A:45 S:45 75.0 1.0 T -91.2 21.1 0.0 0.0 1.0 B:None:1.0
 HOH
 6.336
 O
 O
6bit 3 P78324 100.0 2e-80 X-RAY
 2017-12-06 GLY C:45 H:45 77.0 1.0 T -90.9 22.1 67.0 0.893 0.107 B:None:0.133
 HOH
 3.792
 C
 O
GLY F:45 G:45 80.0 1.0 T -88.8 12.6 NA NA NA
7kpg 3 P78324 99.13 7e-78 X-RAY
 2020-12-16 GLY C:43 S:45 75.0 1.0 T -86.0 7.0 75.0 1.0 0.0 HOH
 4.170
 C
 O
2jjv 1 Q5TFQ8 94.12 1e-76 X-RAY
 2008-08-05 GLY A:45 A:45 69.0 0.92 T -111.5 21.8 69.0 0.92 0.0 SO4
HOH
 5.763
3.967
 O
C
 O1
O
GLY B:45 B:45 80.0 1.0 T -88.2 1.4 NA NA NA
2jju 1 O00241 89.92 5e-73 X-RAY
 2008-08-05 GLY A:45 A:45 78.0 1.0 T -89.6 15.3 78.0 1.0 0.0 HOH
 2.766
 O
 O
GLY B:45 B:45 80.0 1.0 T -88.6 15.4 NA NA NA
2jjs 1 P78324 89.08 2e-69 X-RAY
 2008-08-05 ALA A:45 A:45 98.0 0.852 T -101.4 14.9 98.0 0.852 0.0 IOD
HOH
 8.383
3.737
 O
C
 I
O
ALA B:45 B:45 96.0 0.835 T -82.7 -5.3 NA NA NA
2jjt 1 P78324 89.08 2e-69 X-RAY
 2008-08-05 ALA A:45 A:45 101.0 0.878 T -89.1 12.2 101.0 0.878 0.0 HOH
 8.372
 C
 O
ALA B:45 B:45 106.0 0.922 T -89.3 4.8 NA NA NA
2uv3 1 P78324 89.08 2e-69 X-RAY
 2007-03-27 ALA A:45 A:45 99.0 0.861 T -102.4 24.5 99.0 0.861 0.0 HOH
 2.616
 O
 O
ALA B:45 B:45 100.0 0.87 T -101.3 18.1 100.0 0.87 0.0 HOH
 3.977
 C
 O
2jjw 1 Q9P1W8 80.67 1e-66 X-RAY
 2008-08-05 GLY A:45 A:45 80.0 1.0 T -79.7 2.6 80.0 1.0 0.0 HOH
 6.162
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78324-f1 1 P78324 100.0 0.0 GLY A:75 A:75 76.0 1.0 T -90.3 9.3
af-o00241-f1 1 O00241 86.98 0.0 GLY A:74 A:74 80.0 1.0 G -92.3 7.5