Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 1896060 . T A CCDS13022.1:NM_001040022.1:c.395gTg>gAg_NP_001035111.1:p.132V>E Homo sapiens signal regulatory protein alpha (SIRPA), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2wng 1 P78324 95.94 0.0 X-RAY
 2009-07-21 THR A:101 A:101 68.0 0.486 E -89.5 157.7 68.0 0.486 0.0
4i2x 3 Q9P1W8 82.19 0.0 X-RAY
 2013-12-18 VAL E:102 E:102 67.0 0.432 E -106.6 140.7 67.0 0.432 0.0 HOH
 5.081
 N
 O
VAL F:102 F:102 68.0 0.439 E -122.4 149.3 NA NA NA
4cmm 1 P78324 100.0 6e-82 X-RAY
 2014-02-26 VAL A:102 A:102 92.0 0.594 E -114.0 126.1 92.0 0.594 0.0 HOH
 3.459
 CA
 O
6nmr 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 VAL C:102 S:102 69.0 0.445 E -128.1 144.6 69.0 0.445 0.0 HOH
 6.505
 N
 O
VAL F:102 E:102 78.0 0.503 E -132.1 151.4 NA NA NA
VAL I:102 I:102 82.0 0.529 E -102.0 138.0 NA NA NA
VAL L:102 M:102 57.0 NA E -149.0 140.6 NA NA NA
6nms 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 VAL C:102 S:102 62.0 0.4 E -125.0 144.0 62.0 0.4 0.0 HOH
 7.286
 C
 O
VAL F:102 C:102 72.0 0.465 E -120.2 144.5 NA NA NA
6nmt 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 VAL C:102 C:102 56.0 0.361 E -121.4 145.0 56.0 0.361 0.0 HOH
 3.510
 CG2
 O
6nmu 3 P78324 99.16 7e-81 X-RAY
 2019-08-07 VAL C:102 S:102 70.0 0.452 E -123.5 128.5 70.0 0.452 0.0 HOH
 6.732
 N
 O
VAL F:102 C:102 79.0 0.51 E -113.5 141.2 NA NA NA
6nmv 1 P78324 99.16 7e-81 X-RAY
 2019-08-07 VAL A:102 S:102 75.0 0.484 E -105.8 152.0 32.0 0.206 0.278 C:None:0.277
6bit 3 P78324 100.0 2e-80 X-RAY
 2017-12-06 VAL C:102 H:102 42.0 0.271 E -117.6 134.2 42.0 0.271 0.0 HOH
 3.642
 CA
 O
VAL F:102 G:102 47.0 0.303 E -119.6 130.8 NA NA NA
7kpg 3 P78324 99.13 7e-78 X-RAY
 2020-12-16 VAL C:100 S:102 56.0 0.361 E -122.3 140.5 56.0 0.361 0.0 HOH
 3.511
 CA
 O
2jjv 1 Q5TFQ8 94.12 1e-76 X-RAY
 2008-08-05 VAL A:102 A:102 91.0 0.587 E -113.9 135.4 91.0 0.587 0.0 HOH
 3.606
 CG1
 O
VAL B:102 B:102 71.0 0.458 E -121.1 149.6 NA NA NA
2jju 1 O00241 89.92 5e-73 X-RAY
 2008-08-05 VAL A:102 A:102 61.0 0.394 E -124.7 136.7 61.0 0.394 0.0 HOH
 3.522
 CG1
 O
VAL B:102 B:102 89.0 0.574 E -132.9 150.5 NA NA NA
2jjs 1 P78324 89.08 2e-69 X-RAY
 2008-08-05 THR A:101 A:101 82.0 0.586 E -121.4 143.1 82.0 0.586 0.0 IOD
HOH
 9.451
2.772
 OG1
OG1
 I
O
THR B:101 B:101 67.0 0.479 E -119.1 142.9 NA NA NA
2jjt 1 P78324 89.08 2e-69 X-RAY
 2008-08-05 THR A:101 A:101 82.0 0.586 E -125.8 150.6 82.0 0.586 0.0 HOH
 8.105
 N
 O
THR B:101 B:101 81.0 0.579 E -127.7 149.0 NA NA NA
2uv3 1 P78324 89.08 2e-69 X-RAY
 2007-03-27 THR A:101 A:101 73.0 0.521 E -128.3 154.9 73.0 0.521 0.0 HOH
 3.466
 CG2
 O
THR B:101 B:101 68.0 0.486 E -123.3 160.4 68.0 0.486 0.0 HOH
 3.520
 CG2
 O
2jjw 1 Q9P1W8 80.67 1e-66 X-RAY
 2008-08-05 VAL A:102 A:102 91.0 0.587 E -125.4 141.3 91.0 0.587 0.0 HOH
 5.001
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78324-f1 1 P78324 100.0 0.0 VAL A:132 A:132 85.0 0.548 E -106.8 133.1
af-o00241-f1 1 O00241 86.98 0.0 VAL A:131 A:131 80.0 0.516 E -109.3 135.5