Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55929168 . A C CCDS13458.1:NM_001015885.1:c.74aAt>aCt_NP_001015885.1:p.25N>T Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 ASN A:25 A:25 67.0 0.419 S -110.9 25.8 67.0 0.419 0.0 HOH
 3.025
 OD1
 O
ASN C:25 C:25 72.0 0.45 S -112.6 27.3 NA NA NA
ASN E:25 E:25 73.0 0.456 S -106.9 23.2 NA NA NA
ASN G:25 G:25 75.0 0.469 -110.7 24.5 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASN A:25 A:25 152.0 0.95 360.0 -58.7 152.0 0.95 0.0 HOH
 2.290
 OD1
 O
ASN C:25 C:25 157.0 0.981 360.0 -56.8 NA NA NA
ASN E:25 E:25 92.0 0.575 76.2 -3.7 NA NA NA
ASN G:25 G:25 112.0 0.7 41.0 40.9 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASN A:25 A:25 156.0 0.975 360.0 -46.2 156.0 0.975 0.0 HOH
 8.940
 O
 O
ASN C:25 C:25 163.0 1.0 360.0 -36.9 NA NA NA
ASN E:25 E:25 175.0 1.0 360.0 126.3 NA NA NA
ASN G:25 NA:NA DO NA DO DO DO NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 ASN A:4 A:25 62.0 0.388 -117.6 30.4 62.0 0.388 0.0 HOH
 3.082
 N
 O
ASN E:4 D:25 62.0 0.388 -123.2 22.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 ASN A:25 A:25 94.0 0.588 -98.7 21.9