Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55929172 . C A CCDS13458.1:NM_001015885.1:c.78caC>caA_NP_001015885.1:p.26H>Q Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 HIS A:26 A:26 41.0 0.21 S -76.3 -27.6 41.0 0.21 0.0 HOH
 2.873
 O
 O
HIS C:26 C:26 30.0 0.154 S -78.2 -26.8 NA NA NA
HIS E:26 E:26 39.0 0.2 S -76.1 -26.8 NA NA NA
HIS G:26 G:26 35.0 0.179 S -76.9 -31.6 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 HIS A:26 A:26 54.0 0.277 -77.7 -30.5 54.0 0.277 0.0 HOH
 2.386
 O
 O
HIS C:26 C:26 45.0 0.231 -79.1 -28.0 NA NA NA
HIS E:26 E:26 45.0 0.231 S -77.9 -31.2 NA NA NA
HIS G:26 G:26 42.0 0.215 S -76.3 -24.5 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 HIS A:26 A:26 65.0 0.333 -69.7 -34.8 65.0 0.333 0.0 HOH
 9.727
 O
 O
HIS C:26 C:26 56.0 0.287 -94.6 -41.4 NA NA NA
HIS E:26 E:26 55.0 0.282 -137.1 -32.9 NA NA NA
HIS G:26 G:26 146.0 0.749 360.0 -68.4 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 HIS A:5 A:26 40.0 0.205 S -67.6 -36.3 40.0 0.205 0.0 HOH
 2.549
 O
 O
HIS E:5 D:26 41.0 0.21 S -67.7 -24.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 HIS A:26 A:26 22.0 0.113 S -73.3 -28.4