Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55931594 . C A CCDS13458.1:NM_001015885.1:c.288gaC>gaA_NP_001015885.1:p.96D>E Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 ASP A:96 A:96 60.0 0.4 T -64.4 -24.8 60.0 0.4 0.0 MES
HOH
 2.578
2.866
 OD1
O
 O1S
O
ASP C:96 C:96 53.0 0.353 T -59.9 -30.9 NA NA NA
ASP E:96 E:96 60.0 0.4 T -65.6 -23.9 NA NA NA
ASP G:96 G:96 56.0 0.373 T -60.0 -31.4 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASP A:96 A:96 53.0 0.353 T -66.3 -26.7 53.0 0.353 0.0 HOH
 2.801
 OD1
 O
ASP C:96 C:96 60.0 0.4 T -67.2 -30.7 NA NA NA
ASP E:96 E:96 56.0 0.373 T -65.3 -27.8 NA NA NA
ASP G:96 G:96 55.0 0.367 T -64.0 -29.5 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASP A:96 A:96 55.0 0.367 T -53.5 -38.7 55.0 0.367 0.0 HOH
 8.534
 OD2
 O
ASP C:96 C:96 55.0 0.367 T -54.8 -36.6 NA NA NA
ASP E:96 E:96 45.0 0.3 T -53.9 -37.8 NA NA NA
ASP G:96 G:96 53.0 0.353 T -54.3 -38.5 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 ASP A:75 A:96 52.0 0.347 T -49.5 -38.6 52.0 0.347 0.0 HG
HOH
 8.352
5.201
 N
N
 HG
O
ASP E:75 D:96 54.0 0.36 T -65.4 -25.5 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 ASP A:67 A:96 55.0 0.367 T -62.6 -33.3 55.0 0.367 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 ASP A:96 A:96 51.0 0.34 T -66.4 -30.8