Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55940482 . C A CCDS13458.1:NM_001015885.1:c.359gCg>gAg_NP_001015885.1:p.120A>E Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 ALA A:120 A:120 28.0 0.243 E -122.5 137.6 28.0 0.243 0.0 HOH
 4.131
 CA
 O
ALA C:120 C:120 24.0 0.209 E -121.7 136.0 NA NA NA
ALA E:120 E:120 23.0 0.2 E -123.2 136.7 NA NA NA
ALA G:120 G:120 27.0 0.235 E -120.5 136.2 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ALA A:120 A:120 21.0 0.183 E -130.1 141.7 21.0 0.183 0.0 HOH
 7.764
 CB
 O
ALA C:120 C:120 28.0 0.243 E -132.3 142.0 NA NA NA
ALA E:120 E:120 29.0 0.252 E -133.2 140.0 NA NA NA
ALA G:120 G:120 33.0 0.287 E -130.1 140.6 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ALA A:120 A:120 22.0 0.191 E -134.9 135.2 22.0 0.191 0.0
ALA C:120 C:120 22.0 0.191 E -133.1 135.7 NA NA NA
ALA E:120 E:120 16.0 0.139 E -132.4 134.2 NA NA NA
ALA G:120 G:120 30.0 0.261 E -130.2 139.3 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 ALA A:99 A:120 22.0 0.191 E -112.7 142.2 22.0 0.191 0.0 HOH
 2.568
 N
 O
ALA E:99 D:120 21.0 0.183 E -125.2 135.8 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 ALA A:91 A:120 25.0 0.217 E -118.0 147.2 25.0 0.217 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 ALA A:120 A:120 32.0 0.278 E -122.9 135.7