Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55941872 . C A CCDS13458.1:NM_001015885.1:c.385Cct>Act_NP_001015885.1:p.129P>T Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 PRO A:129 A:129 23.0 0.159 -46.5 138.9 13.0 0.09 0.069 B:P52948:0.069
 HOH
 3.636
 CD
 O
PRO C:129 C:129 23.0 0.159 -50.3 139.6 NA NA NA
PRO E:129 E:129 24.0 0.166 -46.6 141.2 NA NA NA
PRO G:129 G:129 23.0 0.159 -52.5 140.2 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 PRO A:129 A:129 25.0 0.172 -49.3 152.4 15.0 0.103 0.069 B:P52948:0.069
 HOH
 6.241
 CD
 O
PRO C:129 C:129 26.0 0.179 -50.3 152.4 NA NA NA
PRO E:129 E:129 25.0 0.172 -49.7 151.8 NA NA NA
PRO G:129 G:129 24.0 0.166 -51.1 152.6 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 PRO A:129 A:129 28.0 0.193 -53.4 150.4 17.0 0.117 0.076 B:P52948:0.076
 HOH
 9.486
 C
 O
PRO C:129 C:129 27.0 0.186 -58.9 154.4 NA NA NA
PRO E:129 E:129 23.0 0.159 -51.4 151.4 NA NA NA
PRO G:129 G:129 25.0 0.172 -56.1 151.5 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 PRO A:108 A:129 26.0 0.179 -49.3 143.7 16.0 0.11 0.069 B:Q3TPG3:0.069
 HOH
 4.106
 CD
 O
PRO E:108 D:129 30.0 0.207 -53.4 147.7 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 PRO A:100 A:129 25.0 0.172 -52.8 142.9 15.0 0.103 0.069 B:P52948:0.069

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 PRO A:129 A:129 25.0 0.172 -44.7 136.0