Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55941902 . C A CCDS13458.1:NM_001015885.1:c.415Cca>Aca_NP_001015885.1:p.139P>T Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 PRO A:139 A:139 115.0 0.793 S -60.2 -34.6 115.0 0.793 0.0 MES
HOH
 9.307
4.269
 N
O
 O3S
O
PRO C:139 C:139 114.0 0.786 S -59.7 -33.8 NA NA NA
PRO E:139 E:139 115.0 0.793 S -59.1 -33.0 NA NA NA
PRO G:139 G:139 116.0 0.8 S -61.3 -32.9 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 PRO A:139 A:139 115.0 0.793 S -52.0 -35.8 115.0 0.793 0.0 HOH
 3.613
 CG
 O
PRO C:139 C:139 108.0 0.745 S -53.2 -38.7 NA NA NA
PRO E:139 E:139 107.0 0.738 T -51.2 -32.9 NA NA NA
PRO G:139 G:139 110.0 0.759 S -51.9 -37.9 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 PRO A:139 A:139 119.0 0.821 T -54.3 -27.9 119.0 0.821 0.0
PRO C:139 C:139 117.0 0.807 S -58.2 -29.8 NA NA NA
PRO E:139 E:139 114.0 0.786 S -56.1 -27.6 NA NA NA
PRO G:139 G:139 114.0 0.786 S -57.1 -29.9 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 PRO A:118 A:139 113.0 0.779 S -51.1 -47.0 113.0 0.779 0.0 HOH
 3.778
 O
 O
PRO E:118 D:139 106.0 0.731 S -90.7 7.8 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 PRO A:110 A:139 119.0 0.821 T -28.8 -48.1 119.0 0.821 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 PRO A:139 A:139 114.0 0.786 S -60.9 -29.9