Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55942091 . A C CCDS13458.1:NM_001015885.1:c.490Atg>Ctg_NP_001015885.1:p.164M>L Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 MET A:164 A:164 98.0 0.53 S -74.3 -13.9 98.0 0.53 0.0 HOH
 3.523
 CE
 O
MET C:164 C:164 100.0 0.541 S -73.5 -13.3 NA NA NA
MET E:164 E:164 100.0 0.541 S -73.3 -14.6 NA NA NA
MET G:164 G:164 101.0 0.546 S -72.1 -15.0 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 MET A:164 A:164 72.0 0.389 S -56.5 -34.1 72.0 0.389 0.0 HOH
 3.904
 N
 O
MET C:164 C:164 67.0 0.362 S -56.8 -33.2 NA NA NA
MET E:164 E:164 86.0 0.465 S -59.1 -35.1 NA NA NA
MET G:164 G:164 64.0 0.346 S -57.9 -32.1 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 MET A:164 A:164 83.0 0.449 S -65.0 -39.7 83.0 0.449 0.0 HOH
 6.609
 CE
 O
MET C:164 C:164 83.0 0.449 S -67.8 -37.8 NA NA NA
MET E:164 E:164 77.0 0.416 S -65.0 -42.6 NA NA NA
MET G:164 G:164 87.0 0.47 S -65.2 -37.4 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 MET A:143 A:164 84.0 0.454 S -64.4 -20.6 84.0 0.454 0.0 HG
HOH
 3.187
3.893
 CE
N
 HG
O
MET E:143 D:164 92.0 0.497 S -77.9 -17.7 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 MET A:135 A:164 96.0 0.519 S -83.2 -21.1 96.0 0.519 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 MET A:164 A:164 101.0 0.546 S -69.4 -22.4