Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55948544 . C A CCDS13458.1:NM_001015885.1:c.656gCt>gAt_NP_001015885.1:p.219A>D Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 ALA A:219 A:219 6.0 0.052 E -143.4 135.0 6.0 0.052 0.0 HOH
 3.773
 CB
 O
ALA C:219 C:219 6.0 0.052 E -144.2 134.3 NA NA NA
ALA E:219 E:219 6.0 0.052 E -143.2 134.5 NA NA NA
ALA G:219 G:219 6.0 0.052 E -143.9 134.5 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ALA A:219 A:219 6.0 0.052 E -146.8 131.1 6.0 0.052 0.0 HOH
 3.816
 CB
 O
ALA C:219 C:219 6.0 0.052 E -146.3 132.2 NA NA NA
ALA E:219 E:219 6.0 0.052 E -145.4 133.0 NA NA NA
ALA G:219 G:219 6.0 0.052 E -146.4 133.7 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ALA A:219 A:219 7.0 0.061 E -144.7 136.5 7.0 0.061 0.0 HOH
 3.759
 CB
 O
ALA C:219 C:219 5.0 0.043 E -140.1 135.8 NA NA NA
ALA E:219 E:219 5.0 0.043 E -140.3 134.3 NA NA NA
ALA G:219 G:219 5.0 0.043 E -142.9 132.7 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 ALA A:198 A:219 6.0 0.052 E -149.8 122.3 6.0 0.052 0.0 HG
HOH
 8.614
3.953
 CB
CB
 HG
O
ALA E:198 D:219 6.0 0.052 E -141.2 127.4 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 ALA A:190 A:219 4.0 0.035 E -143.9 126.4 4.0 0.035 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 ALA A:219 A:219 6.0 0.052 E -140.9 131.5