Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 55948625 . A C CCDS13458.1:NM_001015885.1:c.737aAc>aCc_NP_001015885.1:p.246N>T Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3mmy 1 P78406 100.0 0.0 X-RAY
 2010-06-02 ASN A:246 A:246 127.0 0.794 S -138.9 64.3 127.0 0.794 0.0 HOH
 2.874
 N
 O
ASN C:246 C:246 128.0 0.8 S -138.4 65.2 NA NA NA
ASN E:246 E:246 122.0 0.762 S -138.0 65.1 NA NA NA
ASN G:246 G:246 132.0 0.825 S -136.5 65.4 NA NA NA
7vpg 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASN A:246 A:246 140.0 0.875 S -140.6 59.3 140.0 0.875 0.0 HOH
 2.834
 N
 O
ASN C:246 C:246 137.0 0.856 S -144.9 62.0 NA NA NA
ASN E:246 E:246 143.0 0.894 S -142.1 60.2 NA NA NA
ASN G:246 G:246 141.0 0.881 S -143.7 61.9 NA NA NA
7vph 1 P78406 100.0 0.0 X-RAY
 2022-01-19 ASN A:246 A:246 143.0 0.894 S -145.7 65.1 143.0 0.894 0.0 HOH
 2.498
 N
 O
ASN C:246 C:246 145.0 0.906 S -142.4 63.5 NA NA NA
ASN E:246 E:246 143.0 0.894 S -145.0 62.8 NA NA NA
ASN G:246 G:246 145.0 0.906 S -141.0 63.8 NA NA NA
7byf 1 Q8C570 99.42 0.0 X-RAY
 2021-03-24 ASN A:225 A:246 134.0 0.838 S -127.4 60.3 134.0 0.838 0.0 HOH
 2.433
 OD1
 O
ASN E:225 D:246 146.0 0.912 S -134.1 62.0 NA NA NA
4owr 1 P78406 100.0 0.0 X-RAY
 2014-06-25 ASN A:217 A:246 143.0 0.894 S -137.8 72.4 143.0 0.894 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p78406-f1 1 P78406 100.0 0.0 ASN A:246 A:246 120.0 0.75 S -133.1 61.9