Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 6759527 . G A CCDS13099.1:NM_001200.2:c.982Gaa>Aaa_NP_001191.1:p.328E>K Homo sapiens bone morphogenetic protein 2 (BMP2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1es7 1 P12643 100.0 1e-82 X-RAY
 2000-10-07 GLU A:48 A:46 100.0 0.526 B -75.3 156.6 100.0 0.526 0.0 HOH
 2.850
 CB
 O
GLU C:48 C:546 101.0 0.532 B -75.3 156.9 101.0 0.532 0.0 HOH
 2.680
 OE2
 O
2qj9 1 P12643 100.0 1e-82 X-RAY
 2008-01-15 GLU A:48 B:46 87.0 0.458 B -66.6 146.0 87.0 0.458 0.0 HOH
 2.876
 CB
 O
GLU B:48 A:46 61.0 0.321 B -69.5 146.1 61.0 0.321 0.0 HOH
 2.356
 OE1
 O
2qja 1 P12643 100.0 1e-82 X-RAY
 2008-01-15 GLU A:48 A:46 72.0 0.379 B -68.9 151.4 72.0 0.379 0.0 HOH
 6.505
 O
 O
GLU B:48 B:46 72.0 0.379 B -60.0 145.8 72.0 0.379 0.0 HOH
 7.269
 OE1
 O
2qjb 1 P12643 100.0 1e-82 X-RAY
 2008-01-15 GLU A:48 A:46 96.0 0.505 B -73.3 152.1 96.0 0.505 0.0 HOH
 6.462
 O
 O
GLU B:48 B:46 75.0 0.395 B -63.6 149.0 75.0 0.395 0.0 HOH
 2.944
 OE2
 O
1rew 1 P12643 100.0 2e-82 X-RAY
 2004-05-04 GLU A:46 A:46 88.0 0.463 B -68.5 150.2 88.0 0.463 0.0 HOH
 2.522
 OE1
 O
GLU B:46 B:46 92.0 0.484 B -70.8 149.2 92.0 0.484 0.0 HOH
 3.881
 C
 O
2goo 1 P12643 100.0 2e-82 X-RAY
 2006-05-09 GLU A:46 A:46 101.0 0.532 B -66.2 146.9 101.0 0.532 0.0 HOH
 3.682
 C
 O
GLU D:46 D:46 94.0 0.495 B -72.4 146.5 94.0 0.495 0.0 HOH
 2.763
 OE1
 O
2h62 1 P12643 100.0 2e-82 X-RAY
 2007-04-10 GLU A:46 A:46 95.0 0.5 B -73.6 157.8 95.0 0.5 0.0 HOH
 3.573
 CA
 O
GLU B:46 B:46 93.0 0.489 B -70.6 142.1 93.0 0.489 0.0 HOH
 2.533
 OE2
 O
3bmp 1 P12643 100.0 2e-82 X-RAY
 2000-03-12 GLU A:46 A:46 97.0 0.511 B -59.9 147.6 97.0 0.511 0.0 HOH
 9.658
 N
 O
4uhy 1 P12643 100.0 2e-82 X-RAY
 2015-05-06 GLU A:46 A:328 66.0 0.347 B -75.9 152.7 66.0 0.347 0.0
GLU B:46 B:328 71.0 0.374 B -65.8 146.7 71.0 0.374 0.0
4uhz 1 P12643 100.0 2e-82 X-RAY
 2015-05-06 GLU A:46 A:328 73.0 0.384 B -63.8 142.7 73.0 0.384 0.0 SO4
SO4
SO4
 6.927
5.132
5.685
 O
OE2
N
 O2
O2
O3
4ui0 1 P12643 100.0 2e-82 X-RAY
 2015-05-06 GLU A:46 A:328 83.0 0.437 B -68.9 142.4 83.0 0.437 0.0 HOH
 3.917
 CA
 O
GLU B:46 B:328 80.0 0.421 B -62.2 144.1 80.0 0.421 0.0 HOH
 9.544
 N
 O
4ui1 1 P12643 100.0 2e-82 X-RAY
 2015-05-06 GLU A:46 A:328 89.0 0.468 B -63.3 151.1 89.0 0.468 0.0 HOH
 4.430
 CA
 O
GLU B:46 B:328 84.0 0.442 B -63.2 153.7 NA NA NA
4ui2 2 P12643 100.0 2e-82 X-RAY
 2015-05-06 GLU B:46 B:328 80.0 0.421 -77.5 161.3 80.0 0.421 0.0
2h64 1 P12643 98.25 8e-81 X-RAY
 2007-04-10 GLU A:46 A:46 85.0 0.447 B -72.3 148.5 85.0 0.447 0.0 HOH
 2.875
 OE2
 O
3bk3 1 P12643 98.25 1e-80 X-RAY
 2008-05-27 GLU A:46 A:46 71.0 0.374 B -78.1 151.6 71.0 0.374 0.0 HOH
 4.736
 CA
 O
GLU B:46 B:46 41.0 0.216 B -81.4 139.2 41.0 0.216 0.0 HOH
 4.721
 OE2
 O
6omn 1 P12643 100.0 1e-77 X-RAY
 2019-05-08 GLU A:40 E:46 122.0 0.642 B -74.1 154.0 122.0 0.642 0.0 NAG
 8.625
 O
 C8
GLU B:40 F:46 81.0 0.426 B -80.3 147.0 81.0 0.426 0.0 NAG
HOH
 8.514
7.196
 O
OE2
 C8
O
GLU C:40 G:46 72.0 0.379 B -88.2 147.5 NA NA NA
GLU D:40 H:46 80.0 0.421 B -74.9 145.7 NA NA NA
1reu 1 P12643 99.03 2e-75 X-RAY
 2004-05-04 GLU A:35 A:46 107.0 0.563 B -86.9 137.1 107.0 0.563 0.0 HOH
 5.680
 N
 O
4mid 1 ? 81.42 2e-68 X-RAY
 2014-05-07 GLU A:47 A:46 84.0 0.442 B -83.5 160.5 84.0 0.442 0.0 HOH
 4.152
 CA
 O
6oml 1 ? 85.71 9e-65 X-RAY
 2019-05-15 GLU A:36 X:46 91.0 0.479 B -83.8 146.3 91.0 0.479 0.0 HOH
 6.877
 OE2
 O
GLU B:36 Y:46 80.0 0.421 B -87.7 150.3 80.0 0.421 0.0 NAG
HOH
 7.967
3.114
 O
CB
 C8
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p12643-f1 1 P12643 100.0 0.0 GLU A:328 A:328 98.0 0.516 B -88.2 150.1