Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2276714 . C A CCDS33435.1:NM_003245.3:c.5gCt>gAt_NP_003236.3:p.2A>D Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:1 A:1 108.0 0.939 360.0 150.2 108.0 0.939 0.0 HOH
 6.736
 O
 O
ALA B:1 B:1 105.0 0.913 360.0 136.0 105.0 0.913 0.0 HOH
 5.466
 C
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:1 A:1 107.0 0.93 360.0 127.7 107.0 0.93 0.0 HOH
 5.388
 C
 O
ALA B:1 B:1 104.0 0.904 360.0 149.2 104.0 0.904 0.0 HOH
 5.007
 C
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:1 A:1 104.0 0.904 360.0 152.8 104.0 0.904 0.0 HOH
 7.256
 O
 O
ALA B:1 B:1 114.0 0.991 360.0 -122.7 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:1 A:1 118.0 1.0 360.0 -155.0 118.0 1.0 0.0 HOH
 5.551
 CA
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:1 A:1 109.0 0.948 360.0 155.5 109.0 0.948 0.0 HOH
 6.435
 C
 O
ALA B:1 B:1 101.0 0.878 360.0 92.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ALA A:2 A:2 68.0 0.591 -65.7 141.4