Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2290371 . T A CCDS33435.1:NM_003245.3:c.76Tcc>Acc_NP_003236.3:p.26S>T Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:25 A:25 58.0 0.504 S -61.2 -31.1 58.0 0.504 0.0 CL
HOH
 6.236
3.423
 C
N
 CL
O
SER B:25 B:25 65.0 0.565 S -61.2 -28.0 65.0 0.565 0.0 CL
HOH
 6.066
2.938
 C
OG
 CL
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:25 A:25 61.0 0.53 S -63.7 -15.2 61.0 0.53 0.0 CL
HOH
 5.693
2.584
 OG
O
 CL
O
SER B:25 B:25 43.0 0.374 -72.2 -20.9 43.0 0.374 0.0 CL
HOH
 5.756
3.443
 OG
CA
 CL
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:25 A:25 42.0 0.365 -74.3 -29.4 42.0 0.365 0.0 CL
HOH
 5.388
3.141
 OG
OG
 CL
O
SER B:25 B:25 60.0 0.522 S -76.4 18.3 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:25 A:25 65.0 0.565 S -62.3 -24.2 65.0 0.565 0.0 CL
HOH
 6.001
2.910
 C
OG
 CL
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:25 A:25 48.0 0.417 S -80.1 83.6 48.0 0.417 0.0 CL
HOH
 4.784
3.006
 O
O
 CL
O
SER B:25 B:25 55.0 0.478 S -81.0 90.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 SER A:26 A:26 54.0 0.47 S -63.9 -25.2