Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2290958 . G A CCDS33435.1:NM_003245.3:c.316Gca>Aca_NP_003236.3:p.106A>T Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:105 A:105 1.0 0.009 -71.1 143.6 1.0 0.009 0.0 HOH
 3.921
 CA
 O
ALA B:105 B:105 1.0 0.009 -69.2 144.8 1.0 0.009 0.0 HOH
 3.588
 CA
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:105 A:105 2.0 0.017 -72.1 147.7 2.0 0.017 0.0 HOH
 3.706
 CA
 O
ALA B:105 B:105 1.0 0.009 -71.2 149.0 1.0 0.009 0.0 HOH
 3.770
 CA
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:105 A:105 0.0 0.0 S -77.0 156.3 0.0 0.0 0.0 HOH
 5.796
 C
 O
ALA B:105 B:105 1.0 0.009 -67.5 149.0 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:105 A:105 0.0 0.0 -76.7 144.7 0.0 0.0 0.0 HOH
 5.435
 C
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:105 A:105 0.0 0.0 -64.3 146.0 0.0 0.0 0.0 HOH
 3.610
 CA
 O
ALA B:105 B:105 1.0 0.009 -68.8 140.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ALA A:106 A:106 1.0 0.009 -61.4 141.9