Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2290971 | . | G | A | CCDS33435.1:NM_003245.3:c.329cGg>cAg_NP_003236.3:p.110R>Q | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:109 | A:109 | 93.0 | 0.413 | E | -84.3 | 136.8 | 93.0 | 0.413 | 0.0 |
CL HOH |
5.508 2.872 |
NH2 N |
CL O |
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ARG | B:109 | B:109 | 84.0 | 0.373 | E | -80.6 | 134.1 | 84.0 | 0.373 | 0.0 |
CL HOH |
5.646 2.794 |
NH2 O |
CL O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:109 | A:109 | 89.0 | 0.396 | E | -87.6 | 129.8 | 89.0 | 0.396 | 0.0 |
CL HOH |
5.572 2.741 |
NH2 NH1 |
CL O |
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ARG | B:109 | B:109 | 92.0 | 0.409 | E | -85.3 | 131.7 | 92.0 | 0.409 | 0.0 |
CL HOH |
5.387 2.851 |
NH2 N |
CL O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:109 | A:109 | 93.0 | 0.413 | E | -81.0 | 132.1 | 93.0 | 0.413 | 0.0 |
CL HOH |
5.303 2.693 |
NH2 NE |
CL O |
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ARG | B:109 | B:109 | 93.0 | 0.413 | E | -78.0 | 124.1 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:109 | A:109 | 96.0 | 0.427 | E | -83.9 | 127.2 | 96.0 | 0.427 | 0.0 |
CL HOH |
5.640 2.748 |
NH2 NE |
CL O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:109 | A:109 | 94.0 | 0.418 | E | -91.0 | 124.9 | 94.0 | 0.418 | 0.0 |
CL HOH |
5.525 2.563 |
NH2 O |
CL O |
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ARG | B:109 | B:109 | 89.0 | 0.396 | E | -87.4 | 127.4 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | ARG | A:110 | A:110 | 93.0 | 0.413 | E | -87.8 | 121.1 |