Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2293565 . A C CCDS33435.1:NM_003245.3:c.562Atc>Ctc_NP_003236.3:p.188I>L Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ILE A:187 A:187 1.0 0.006 H -59.8 -42.5 1.0 0.006 0.0 CL
HOH
 5.450
3.825
 N
N
 CL
O
ILE B:187 B:187 1.0 0.006 H -65.1 -40.9 1.0 0.006 0.0 CL
HOH
 5.504
3.817
 N
N
 CL
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ILE A:187 A:187 1.0 0.006 H -61.9 -44.2 1.0 0.006 0.0 CL
HOH
 5.363
3.923
 N
CD1
 CL
O
ILE B:187 B:187 1.0 0.006 H -64.4 -40.7 1.0 0.006 0.0 CL
HOH
 5.427
3.578
 N
CD1
 CL
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ILE A:187 A:187 1.0 0.006 H -59.8 -45.3 1.0 0.006 0.0 CL
HOH
 5.443
3.955
 N
N
 CL
O
ILE B:187 B:187 2.0 0.011 H -71.1 -40.5 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ILE A:187 A:187 2.0 0.011 H -56.6 -44.8 2.0 0.011 0.0 CL
HOH
 5.583
3.984
 N
N
 CL
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ILE A:187 A:187 1.0 0.006 H -65.8 -42.7 1.0 0.006 0.0 CL
HOH
 5.571
3.594
 N
N
 CL
O
ILE B:187 B:187 2.0 0.011 H -59.6 -44.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ILE A:188 A:188 0.0 0.0 H -62.7 -49.4