Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2297721 . G A CCDS33435.1:NM_003245.3:c.677aGc>aAc_NP_003236.3:p.226S>N Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:225 A:225 16.0 0.139 -91.1 3.6 16.0 0.139 0.0 CA
HOH
 3.786
3.164
 C
O
 CA
O
SER B:225 B:225 17.0 0.148 -89.4 1.9 17.0 0.148 0.0 CA
HOH
 3.695
3.158
 C
O
 CA
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:225 A:225 23.0 0.2 -67.5 -11.8 23.0 0.2 0.0 CA
HOH
 3.956
2.652
 C
OG
 CA
O
SER B:225 B:225 22.0 0.191 -69.7 -15.9 22.0 0.191 0.0 CA
HOH
 3.978
2.666
 C
OG
 CA
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:225 A:225 24.0 0.209 S -64.0 -17.1 24.0 0.209 0.0 CA
HOH
 4.056
2.807
 C
OG
 CA
O
SER B:225 B:225 25.0 0.217 S -67.6 -21.9 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:225 A:225 17.0 0.148 S -51.1 -30.2 17.0 0.148 0.0 CA
BR
HOH
 4.364
5.922
2.907
 C
O
CB
 CA
BR
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:225 A:225 23.0 0.2 -76.9 2.4 23.0 0.2 0.0 CA
HOH
 4.051
2.884
 C
OG
 CA
O
SER B:225 B:225 20.0 0.174 -79.2 -7.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 SER A:226 A:226 21.0 0.183 -85.0 1.7