Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2297789 | . | A | C | CCDS33435.1:NM_003245.3:c.745Agc>Cgc_NP_003236.3:p.249S>R | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | SER | A:248 | A:248 | 6.0 | 0.052 | G | -80.5 | -26.8 | 6.0 | 0.052 | 0.0 |
HOH |
2.976 |
O |
O |
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SER | B:248 | B:248 | 7.0 | 0.061 | G | -80.7 | -23.8 | 7.0 | 0.061 | 0.0 |
HOH |
2.649 |
O |
O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | SER | A:248 | A:248 | 7.0 | 0.061 | T | -76.3 | -28.4 | 7.0 | 0.061 | 0.0 |
HOH |
2.691 |
OG |
O |
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SER | B:248 | B:248 | 7.0 | 0.061 | T | -80.6 | -27.7 | 7.0 | 0.061 | 0.0 |
HOH |
2.911 |
O |
O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | SER | A:248 | A:248 | 7.0 | 0.061 | G | -88.0 | -22.4 | 7.0 | 0.061 | 0.0 |
HOH |
3.193 |
OG |
O |
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SER | B:248 | B:248 | 3.0 | 0.026 | T | -82.2 | -22.3 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | SER | A:248 | A:248 | 5.0 | 0.043 | G | -85.1 | -21.7 | 5.0 | 0.043 | 0.0 |
HOH |
3.338 |
CB |
O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | SER | A:248 | A:248 | 5.0 | 0.043 | G | -81.0 | -21.7 | 5.0 | 0.043 | 0.0 |
HOH |
3.279 |
O |
O |
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SER | B:248 | B:248 | 6.0 | 0.052 | T | -75.7 | -28.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | SER | A:249 | A:249 | 5.0 | 0.043 | G | -73.0 | -17.1 |