Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2308830 | . | C | A | CCDS33435.1:NM_003245.3:c.1152ttC>ttA_NP_003236.3:p.384F>L | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | PHE | A:383 | A:383 | 41.0 | 0.195 | T | -125.1 | 156.3 | 41.0 | 0.195 | 0.0 |
HOH |
3.588 |
CE2 |
O |
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PHE | B:383 | B:383 | 38.0 | 0.181 | T | -125.1 | 149.1 | 38.0 | 0.181 | 0.0 |
HOH |
3.721 |
C |
O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | PHE | A:383 | A:383 | 42.0 | 0.2 | T | -126.5 | 153.4 | 42.0 | 0.2 | 0.0 |
HOH |
3.646 |
CA |
O |
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PHE | B:383 | B:383 | 46.0 | 0.219 | T | -125.8 | 150.7 | 46.0 | 0.219 | 0.0 |
HOH |
3.910 |
C |
O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | PHE | A:383 | A:383 | 40.0 | 0.19 | T | -121.9 | 157.8 | 40.0 | 0.19 | 0.0 |
HOH |
3.755 |
CZ |
O |
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PHE | B:383 | B:383 | 44.0 | 0.21 | T | -123.8 | 155.8 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | PHE | A:383 | A:383 | 42.0 | 0.2 | T | -122.3 | 154.7 | 42.0 | 0.2 | 0.0 |
HOH |
3.630 |
N |
O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | PHE | A:383 | A:383 | 45.0 | 0.214 | T | -126.2 | 148.0 | 45.0 | 0.214 | 0.0 |
HOH |
3.706 |
CA |
O |
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PHE | B:383 | B:383 | 43.0 | 0.205 | T | -120.6 | 150.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | PHE | A:384 | A:384 | 40.0 | 0.19 | T | -116.2 | 153.8 |