Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2308868 . G A CCDS33435.1:NM_003245.3:c.1190cGc>cAc_NP_003236.3:p.397R>H Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ARG A:396 A:396 38.0 0.169 E -112.8 113.7 38.0 0.169 0.0 HOH
 2.605
 O
 O
ARG B:396 B:396 34.0 0.151 E -118.2 118.8 34.0 0.151 0.0 HOH
 2.595
 O
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ARG A:396 A:396 27.0 0.12 E -118.9 116.4 27.0 0.12 0.0 CA
CA
HOH
 7.634
8.974
2.752
 N
CA
O
 CA
CA
O
ARG B:396 B:396 33.0 0.147 E -115.1 124.7 33.0 0.147 0.0 CA
CA
HOH
 7.725
9.133
2.802
 N
CA
NH1
 CA
CA
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:396 A:396 25.0 0.111 E -97.4 110.9 25.0 0.111 0.0 CA
CA
HOH
 7.454
8.854
2.773
 N
CA
O
 CA
CA
O
ARG B:396 B:396 41.0 0.182 E -100.4 130.7 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:396 A:396 33.0 0.147 E -99.8 126.5 33.0 0.147 0.0 HOH
 2.814
 NH1
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:396 A:396 35.0 0.156 E -107.0 124.6 35.0 0.156 0.0 CA
MG
HOH
 7.721
9.498
2.986
 N
CA
O
 CA
MG
O
ARG B:396 B:396 28.0 0.124 E -114.9 122.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ARG A:397 A:397 30.0 0.133 E -91.6 118.1