Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2308898 . G A CCDS33435.1:NM_003245.3:c.1220gGc>gAc_NP_003236.3:p.407G>D Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 GLY A:406 A:406 46.0 0.613 T 76.7 2.8 46.0 0.613 0.0 HOH
 4.371
 O
 O
GLY B:406 B:406 43.0 0.573 T 70.4 1.1 43.0 0.573 0.0 HOH
 7.523
 N
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 GLY A:406 A:406 48.0 0.64 T 65.5 2.6 48.0 0.64 0.0 HOH
 2.632
 O
 O
GLY B:406 B:406 47.0 0.627 T 73.2 9.4 47.0 0.627 0.0 HOH
 7.097
 N
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 GLY A:406 A:406 49.0 0.653 T 73.5 -0.1 49.0 0.653 0.0 HOH
 9.832
 O
 O
GLY B:406 B:406 55.0 0.733 66.2 -5.6 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 GLY A:406 A:406 39.0 0.52 71.5 -14.8 39.0 0.52 0.0 HOH
 7.160
 N
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 GLY A:406 A:406 46.0 0.613 86.9 -12.8 46.0 0.613 0.0 HOH
 7.329
 N
 O
GLY B:406 B:406 43.0 0.573 T 73.0 -0.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 GLY A:407 A:407 46.0 0.613 T 70.4 7.1