Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2308927 . C A CCDS33435.1:NM_003245.3:c.1249Cac>Aac_NP_003236.3:p.417H>N Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 HIS A:416 A:416 46.0 0.236 S -135.6 2.8 46.0 0.236 0.0 HOH
 2.732
 ND1
 O
HIS B:416 B:416 41.0 0.21 S -143.9 15.5 41.0 0.21 0.0 HOH
 2.640
 ND1
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 HIS A:416 A:416 69.0 0.354 S -127.0 -10.5 69.0 0.354 0.0 CA
HOH
 3.952
2.824
 CA
ND1
 CA
O
HIS B:416 B:416 109.0 0.559 S -126.7 -16.9 109.0 0.559 0.0 CA
HOH
 4.192
3.163
 CA
CA
 CA
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 HIS A:416 A:416 76.0 0.39 S -144.7 -16.4 76.0 0.39 0.0 CA
HOH
 4.066
3.148
 N
CA
 CA
O
HIS B:416 B:416 81.0 0.415 S -123.9 -2.0 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 HIS A:416 A:416 87.0 0.446 S -123.6 -23.8 87.0 0.446 0.0 HOH
 2.689
 CD2
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 HIS A:416 A:416 80.0 0.41 S -127.5 -0.5 80.0 0.41 0.0 CA
HOH
 4.100
3.406
 CA
CA
 CA
O
HIS B:416 B:416 81.0 0.415 S -127.0 -8.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 HIS A:417 A:417 67.0 0.344 S -129.9 -2.7