Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2308995 . G A CCDS33435.1:NM_003245.3:c.1317aaG>aaA_NP_003236.3:p.439K>K Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 LYS A:438 A:438 108.0 0.54 H -89.2 -31.7 108.0 0.54 0.0 HOH
 2.744
 O
 O
LYS B:438 B:438 111.0 0.555 H -93.5 -24.1 111.0 0.555 0.0 HOH
 2.845
 O
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 LYS A:438 A:438 126.0 0.63 H -88.0 -26.6 126.0 0.63 0.0 HOH
 2.735
 O
 O
LYS B:438 B:438 118.0 0.59 H -87.4 -27.3 118.0 0.59 0.0 HOH
 2.703
 O
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LYS A:438 A:438 120.0 0.6 H -93.4 -30.1 120.0 0.6 0.0 CL
HOH
 4.308
3.316
 CE
CG
 CL
O
LYS B:438 B:438 117.0 0.585 H -99.7 -23.4 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LYS A:438 A:438 102.0 0.51 H -95.3 -32.1 102.0 0.51 0.0 CL
HOH
 3.796
3.315
 CE
CD
 CL
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LYS A:438 A:438 115.0 0.575 H -85.4 -28.1 115.0 0.575 0.0 HOH
 3.398
 CB
 O
LYS B:438 B:438 114.0 0.57 H -91.7 -30.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 LYS A:439 A:439 101.0 0.505 H -85.4 -24.3