Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2312773 . C A CCDS33435.1:NM_003245.3:c.1459Ctg>Atg_NP_003236.3:p.487L>M Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 LEU A:486 A:486 4.0 0.024 E -99.2 123.6 4.0 0.024 0.0 BR
HOH
 8.547
2.859
 O
N
 BR
O
LEU B:486 B:486 8.0 0.047 E -105.8 133.0 8.0 0.047 0.0 BR
HOH
 8.658
3.669
 O
O
 BR
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 LEU A:486 A:486 5.0 0.029 E -99.8 125.0 5.0 0.029 0.0 BGL
HOH
 5.098
2.896
 O
N
 C6'
O
LEU B:486 B:486 5.0 0.029 E -100.1 130.8 5.0 0.029 0.0 BGL
HOH
 4.456
3.479
 O
O
 C8'
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LEU A:486 A:486 4.0 0.024 E -95.2 128.7 4.0 0.024 0.0 BR
BR
HOH
 9.140
4.486
2.677
 O
O
O
 BR
BR
O
LEU B:486 B:486 11.0 0.065 E -98.2 134.5 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LEU A:486 A:486 11.0 0.065 E -88.6 141.3 11.0 0.065 0.0 BR
HOH
 8.971
3.420
 O
O
 BR
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 LEU A:486 A:486 2.0 0.012 E -104.5 117.8 2.0 0.012 0.0 HOH
 2.842
 O
 O
LEU B:486 B:486 4.0 0.024 E -109.8 120.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 LEU A:487 A:487 4.0 0.024 E -88.3 123.2