Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2312788 . A C CCDS33435.1:NM_003245.3:c.1474Atg>Ctg_NP_003236.3:p.492M>L Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 MET A:491 A:491 119.0 0.643 -85.7 142.0 119.0 0.643 0.0 BR
HOH
 8.813
3.521
 C
O
 BR
O
MET B:491 B:491 114.0 0.616 -76.1 155.0 101.0 0.546 0.07 A:Q08188:0.07
 BR
HOH
 8.765
3.796
 C
CA
 BR
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 MET A:491 A:491 127.0 0.686 -53.4 144.9 127.0 0.686 0.0 BGL
HOH
 5.187
2.825
 CA
O
 O3
O
MET B:491 B:491 127.0 0.686 -79.0 157.6 121.0 0.654 0.032 A:Q08188:0.032
 BGL
HOH
 4.655
2.873
 CA
O
 O3
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 MET A:491 A:491 130.0 0.703 -68.0 153.6 130.0 0.703 0.0 BR
HOH
 8.503
7.143
 C
O
 BR
O
MET B:491 B:491 135.0 0.73 -92.1 128.7 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 MET A:491 A:491 121.0 0.654 -74.5 103.0 121.0 0.654 0.0 BR
HOH
 9.128
3.437
 C
CE
 BR
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 MET A:491 A:491 119.0 0.643 -91.8 133.6 119.0 0.643 0.0 HOH
 3.054
 O
 O
MET B:491 B:491 116.0 0.627 -100.3 154.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 MET A:492 A:492 111.0 0.6 -88.2 128.2