Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2312938 . T A CCDS33435.1:NM_003245.3:c.1624Tcc>Acc_NP_003236.3:p.542S>T Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:541 A:541 69.0 0.6 E -102.4 122.8 69.0 0.6 0.0 HOH
 2.845
 OG
 O
SER B:541 B:541 72.0 0.626 E -113.1 120.9 72.0 0.626 0.0 HOH
 7.354
 OG
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 SER A:541 A:541 79.0 0.687 E -108.8 110.0 79.0 0.687 0.0 HOH
 2.754
 CA
 O
SER B:541 B:541 74.0 0.643 E -117.6 115.2 74.0 0.643 0.0 HOH
 7.302
 OG
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:541 A:541 64.0 0.557 E -109.8 124.5 64.0 0.557 0.0 HOH
 7.834
 OG
 O
SER B:541 B:541 67.0 0.583 E -110.9 98.6 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:541 A:541 62.0 0.539 E -113.7 122.9 62.0 0.539 0.0
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 SER A:541 A:541 69.0 0.6 E -94.5 138.1 69.0 0.6 0.0 HOH
 3.318
 OG
 O
SER B:541 B:541 67.0 0.583 E -117.7 129.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 SER A:542 A:542 74.0 0.643 E -100.8 119.0