Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2315791 . G A CCDS33435.1:NM_003245.3:c.1672Gct>Act_NP_003236.3:p.558A>T Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:557 A:557 68.0 0.591 H -62.0 -32.8 68.0 0.591 0.0 HOH
 2.975
 O
 O
ALA B:557 B:557 70.0 0.609 H -58.4 -34.8 70.0 0.609 0.0 HOH
 2.583
 O
 O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ALA A:557 A:557 69.0 0.6 H -58.0 -31.2 69.0 0.6 0.0 HOH
 2.550
 O
 O
ALA B:557 B:557 73.0 0.635 H -58.3 -43.1 73.0 0.635 0.0 HOH
 3.308
 N
 O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:557 A:557 68.0 0.591 H -42.2 -42.1 68.0 0.591 0.0 HOH
 3.177
 O
 O
ALA B:557 B:557 69.0 0.6 H -53.5 -37.9 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:557 A:557 62.0 0.539 H -53.2 -37.5 62.0 0.539 0.0 HOH
 3.091
 O
 O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ALA A:557 A:557 63.0 0.548 H -59.1 -40.1 63.0 0.548 0.0 HOH
 2.707
 N
 O
ALA B:557 B:557 64.0 0.557 H -62.5 -39.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ALA A:558 A:558 79.0 0.687 H -61.2 -25.6