Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2315881 . C A CCDS33435.1:NM_003245.3:c.1762Cgg>Agg_NP_003236.3:p.588R>R Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ARG A:587 A:587 43.0 0.191 E -167.2 120.7 43.0 0.191 0.0 BR
HOH
 3.449
2.556
 NH1
NH2
 BR
O
ARG B:587 B:587 54.0 0.24 E -156.2 120.3 54.0 0.24 0.0 BR
HOH
 3.162
2.983
 NH1
NH2
 BR
O
1l9n 1 Q08188 99.42 0.0 X-RAY
 2002-05-29 ARG A:587 A:587 51.0 0.227 E -171.4 122.1 51.0 0.227 0.0 BGL
HOH
 2.666
2.438
 NH1
NE
 O1
O
ARG B:587 B:587 56.0 0.249 E -165.7 116.2 56.0 0.249 0.0 BGL
HOH
 2.672
2.622
 NH1
NH2
 O1
O
1nud 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:587 A:587 57.0 0.253 E -168.8 120.6 57.0 0.253 0.0 BR
BR
HOH
 3.388
3.413
2.484
 NH1
NH2
NH2
 BR
BR
O
ARG B:587 B:587 56.0 0.249 E -164.3 120.5 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:587 A:587 61.0 0.271 E -167.2 121.6 61.0 0.271 0.0 BR
HOH
 3.581
2.791
 NH1
NH2
 BR
O
1nug 1 Q08188 99.42 0.0 X-RAY
 2003-04-22 ARG A:587 A:587 45.0 0.2 E -164.6 118.1 45.0 0.2 0.0 HOH
 2.996
 NH2
 O
ARG B:587 B:587 43.0 0.191 E -169.8 114.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 ARG A:588 A:588 50.0 0.222 E -154.4 115.1