Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2321118 | . | G | A | CCDS33435.1:NM_003245.3:c.1973cGt>cAt_NP_003236.3:p.658R>H | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:657 | A:657 | 145.0 | 0.644 | E | -123.2 | 149.0 | 145.0 | 0.644 | 0.0 |
HOH |
2.789 |
N |
O |
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ARG | B:657 | B:657 | 145.0 | 0.644 | E | -125.4 | 151.3 | 123.0 | 0.547 | 0.097 |
A:Q08188:0.098 |
HOH |
2.550 |
O |
O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:657 | A:657 | 148.0 | 0.658 | E | -109.5 | 142.8 | 148.0 | 0.658 | 0.0 |
HOH |
2.828 |
CD |
O |
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ARG | B:657 | B:657 | 149.0 | 0.662 | E | -123.8 | 146.0 | 124.0 | 0.551 | 0.111 |
A:Q08188:0.111 |
HOH |
2.783 |
N |
O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:657 | A:657 | 96.0 | 0.427 | E | -95.9 | 150.7 | 96.0 | 0.427 | 0.0 |
HOH |
2.804 |
CD |
O |
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ARG | B:657 | B:657 | 106.0 | 0.471 | E | -106.5 | 147.3 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:657 | A:657 | 146.0 | 0.649 | E | -110.9 | 142.4 | 146.0 | 0.649 | 0.0 |
HOH |
6.495 |
NH1 |
O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:657 | A:657 | 103.0 | 0.458 | E | -106.8 | 152.5 | 103.0 | 0.458 | 0.0 |
HOH |
2.701 |
N |
O |
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ARG | B:657 | B:657 | 92.0 | 0.409 | E | -119.6 | 142.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | ARG | A:658 | A:658 | 153.0 | 0.68 | E | -110.8 | 139.5 |