Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2321138 | . | C | A | CCDS33435.1:NM_003245.3:c.1993Cgg>Agg_NP_003236.3:p.665R>R | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:664 | A:664 | 65.0 | 0.289 | S | -144.5 | 123.9 | 65.0 | 0.289 | 0.0 |
HOH |
2.589 |
NH2 |
O |
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ARG | B:664 | B:664 | 66.0 | 0.293 | S | -148.1 | 124.6 | 66.0 | 0.293 | 0.0 |
HOH |
2.590 |
NH2 |
O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | ARG | A:664 | A:664 | 64.0 | 0.284 | S | -142.2 | 126.1 | 64.0 | 0.284 | 0.0 |
HOH |
2.448 |
NH1 |
O |
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ARG | B:664 | B:664 | 65.0 | 0.289 | S | -143.7 | 125.8 | 65.0 | 0.289 | 0.0 |
HOH |
2.619 |
NH1 |
O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:664 | A:664 | 62.0 | 0.276 | S | -141.4 | 142.2 | 62.0 | 0.276 | 0.0 |
HOH |
3.117 |
NH2 |
O |
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ARG | B:664 | B:664 | 80.0 | 0.356 | S | -149.9 | 139.7 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:664 | A:664 | 65.0 | 0.289 | S | -124.6 | 147.3 | 65.0 | 0.289 | 0.0 |
HOH |
2.740 |
NH1 |
O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | ARG | A:664 | A:664 | 69.0 | 0.307 | S | -141.0 | 131.0 | 69.0 | 0.307 | 0.0 |
HOH |
2.917 |
NH1 |
O |
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ARG | B:664 | B:664 | 69.0 | 0.307 | S | -147.4 | 138.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | ARG | A:665 | A:665 | 58.0 | 0.258 | S | -138.2 | 133.7 |