Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 2321150 | . | A | C | CCDS33435.1:NM_003245.3:c.2005Aag>Cag_NP_003236.3:p.669K>Q | Homo sapiens transglutaminase 3 (TGM3), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1l9m | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | LYS | A:668 | A:668 | 14.0 | 0.07 | E | -111.0 | 169.3 | 14.0 | 0.07 | 0.0 |
HOH |
2.805 |
NZ |
O |
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LYS | B:668 | B:668 | 11.0 | 0.055 | E | -105.5 | 161.6 | 11.0 | 0.055 | 0.0 |
HOH |
2.646 |
NZ |
O |
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1l9n | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2002-05-29 | LYS | A:668 | A:668 | 12.0 | 0.06 | E | -107.0 | 168.5 | 12.0 | 0.06 | 0.0 |
HOH |
2.706 |
CE |
O |
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LYS | B:668 | B:668 | 14.0 | 0.07 | E | -107.2 | 168.8 | 14.0 | 0.07 | 0.0 |
HOH |
2.684 |
NZ |
O |
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1nud | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | LYS | A:668 | A:668 | 10.0 | 0.05 | E | -112.3 | 154.8 | 10.0 | 0.05 | 0.0 |
CL HOH |
5.405 3.240 |
O NZ |
CL O |
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LYS | B:668 | B:668 | 12.0 | 0.06 | E | -100.9 | 158.5 | NA | NA | NA | |||||||||||||
1nuf | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | LYS | A:668 | A:668 | 14.0 | 0.07 | E | -113.6 | 160.8 | 14.0 | 0.07 | 0.0 |
CL HOH |
5.353 3.514 |
O CA |
CL O |
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1nug | 1 | Q08188 | 99.42 | 0.0 |
X-RAY |
2003-04-22 | LYS | A:668 | A:668 | 11.0 | 0.055 | E | -112.3 | 158.0 | 11.0 | 0.055 | 0.0 |
HOH |
2.817 |
NZ |
O |
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LYS | B:668 | B:668 | 14.0 | 0.07 | E | -100.0 | 161.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q08188-f1 | 1 | Q08188 | 100.0 | 0.0 | LYS | A:669 | A:669 | 11.0 | 0.055 | E | -113.6 | 161.2 |