Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 2321150 . A C CCDS33435.1:NM_003245.3:c.2005Aag>Cag_NP_003236.3:p.669K>Q Homo sapiens transglutaminase 3 (TGM3), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1l9m 1 Q08188 99.42 0.0 X-RAY
2002-05-29 LYS A:668 A:668 14.0 0.07 E -111.0 169.3 14.0 0.07 0.0 HOH
2.805
NZ
O
LYS B:668 B:668 11.0 0.055 E -105.5 161.6 11.0 0.055 0.0 HOH
2.646
NZ
O
1l9n 1 Q08188 99.42 0.0 X-RAY
2002-05-29 LYS A:668 A:668 12.0 0.06 E -107.0 168.5 12.0 0.06 0.0 HOH
2.706
CE
O
LYS B:668 B:668 14.0 0.07 E -107.2 168.8 14.0 0.07 0.0 HOH
2.684
NZ
O
1nud 1 Q08188 99.42 0.0 X-RAY
2003-04-22 LYS A:668 A:668 10.0 0.05 E -112.3 154.8 10.0 0.05 0.0 CL
HOH
5.405
3.240
O
NZ
CL
O
LYS B:668 B:668 12.0 0.06 E -100.9 158.5 NA NA NA
1nuf 1 Q08188 99.42 0.0 X-RAY
2003-04-22 LYS A:668 A:668 14.0 0.07 E -113.6 160.8 14.0 0.07 0.0 CL
HOH
5.353
3.514
O
CA
CL
O
1nug 1 Q08188 99.42 0.0 X-RAY
2003-04-22 LYS A:668 A:668 11.0 0.055 E -112.3 158.0 11.0 0.055 0.0 HOH
2.817
NZ
O
LYS B:668 B:668 14.0 0.07 E -100.0 161.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08188-f1 1 Q08188 100.0 0.0 LYS A:669 A:669 11.0 0.055 E -113.6 161.2