Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36758647 . G A CCDS13302.1:NM_004613.2:c.2038Cgg>Tgg_NP_004604.2:p.680R>W Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 ARG A:680 A:680 103.0 0.458 E -136.1 132.6 103.0 0.458 0.0 HOH
 5.051
 NE
 O
ARG B:680 B:680 107.0 0.476 E -154.2 122.7 NA NA NA
ARG C:680 E:680 115.0 0.511 E -131.2 131.7 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 ARG A:680 A:680 102.0 0.453 E -145.5 133.3 102.0 0.453 0.0
ARG B:680 B:680 96.0 0.427 E -145.5 136.1 NA NA NA
ARG C:680 C:680 101.0 0.449 E -145.0 136.2 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 ARG A:680 A:680 107.0 0.476 E -144.8 132.0 27.0 0.12 0.356 A:P21980:0.356
ARG B:680 B:680 105.0 0.467 E -144.8 133.0 NA NA NA
ARG C:680 C:680 101.0 0.449 E -145.5 131.3 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:687 A:680 103.0 0.458 E -148.9 120.0 103.0 0.458 0.0
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:687 A:680 17.0 NA E -153.9 136.3 17.0 NA NA
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:687 A:680 78.0 0.347 E -148.4 133.2 78.0 0.347 0.0 HOH
 3.859
 NH2
 O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 ARG A:680 A:680 103.0 0.458 E -150.1 131.6 103.0 0.458 0.0
ARG B:680 B:680 103.0 0.458 E -150.5 132.6 NA NA NA
ARG C:680 C:680 103.0 0.458 E -150.9 132.8 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 ARG A:680 A:680 104.0 0.462 E -157.2 125.6 26.0 0.116 0.346 C:P21980:0.347
 HOH
 4.510
 CD
 O
ARG B:680 B:680 103.0 0.458 E -158.0 125.0 NA NA NA
ARG C:680 C:680 103.0 0.458 E -160.0 124.9 23.0 0.102 0.356 A:P21980:0.356
 HOH
 4.244
 CA
 O
ARG D:680 D:680 103.0 0.458 E -156.8 126.2 NA NA NA
ARG E:680 E:680 104.0 0.462 E -159.4 127.1 NA NA NA
ARG F:680 F:680 103.0 0.458 E -155.6 127.3 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 ARG A:680 A:680 65.0 0.289 E -143.5 132.9 65.0 0.289 0.0 HOH
 7.499
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 ARG A:680 A:680 132.0 0.587 E -139.6 127.4