Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36758761 | . | C | A | CCDS13302.1:NM_004613.2:c.1924Gtg>Ttg_NP_004604.2:p.642V>L | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | VAL | A:642 | A:642 | 5.0 | 0.032 | B | -107.6 | 118.5 | 5.0 | 0.032 | 0.0 |
HOH |
5.626 |
O |
O |
||
| VAL | B:642 | B:642 | 3.0 | 0.019 | B | -107.8 | 124.6 | NA | NA | NA | |||||||||||||
| VAL | C:642 | E:642 | 4.0 | 0.026 | B | -113.7 | 119.0 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | VAL | A:642 | A:642 | 5.0 | 0.032 | B | -108.1 | 115.2 | 5.0 | 0.032 | 0.0 | ||||||
| VAL | B:642 | B:642 | 10.0 | 0.065 | B | -109.7 | 122.8 | NA | NA | NA | |||||||||||||
| VAL | C:642 | C:642 | 8.0 | 0.052 | B | -110.0 | 122.7 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | VAL | A:642 | A:642 | 7.0 | 0.045 | B | -104.9 | 127.1 | 7.0 | 0.045 | 0.0 | ||||||
| VAL | B:642 | B:642 | 12.0 | 0.077 | B | -105.5 | 134.8 | NA | NA | NA | |||||||||||||
| VAL | C:642 | C:642 | 8.0 | 0.052 | B | -107.6 | 127.9 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:649 | A:642 | 6.0 | 0.039 | B | -86.9 | 116.0 | 6.0 | 0.039 | 0.0 | ||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:649 | A:642 | 4.0 | 0.026 | B | -88.5 | 123.5 | 4.0 | 0.026 | 0.0 | ||||||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:649 | A:642 | 4.0 | 0.026 | B | -98.7 | 124.6 | 4.0 | 0.026 | 0.0 | ||||||
| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | VAL | A:642 | A:642 | 7.0 | 0.045 | B | -105.8 | 109.5 | 7.0 | 0.045 | 0.0 | ||||||
| VAL | B:642 | B:642 | 7.0 | 0.045 | B | -105.9 | 110.2 | NA | NA | NA | |||||||||||||
| VAL | C:642 | C:642 | 8.0 | 0.052 | B | -106.4 | 111.2 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | VAL | A:642 | A:642 | 9.0 | 0.058 | B | -101.8 | 109.8 | 9.0 | 0.058 | 0.0 | ||||||
| VAL | B:642 | B:642 | 9.0 | 0.058 | B | -102.6 | 111.9 | NA | NA | NA | |||||||||||||
| VAL | C:642 | C:642 | 8.0 | 0.052 | B | -102.5 | 112.2 | 8.0 | 0.052 | 0.0 |
HOH |
5.509 |
CG2 |
O |
|||||||||
| VAL | D:642 | D:642 | 10.0 | 0.065 | B | -102.5 | 109.2 | NA | NA | NA | |||||||||||||
| VAL | E:642 | E:642 | 9.0 | 0.058 | B | -101.4 | 111.3 | NA | NA | NA | |||||||||||||
| VAL | F:642 | F:642 | 8.0 | 0.052 | B | -101.3 | 111.4 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | VAL | A:642 | A:642 | 8.0 | 0.052 | B | -85.6 | 109.8 | 8.0 | 0.052 | 0.0 |
HOH |
4.745 |
N |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | VAL | A:642 | A:642 | 3.0 | 0.019 | B | -96.2 | 109.0 | |