Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36759495 | . | A | C | CCDS13302.1:NM_004613.2:c.1913aTc>aGc_NP_004604.2:p.638I>S | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | ILE | A:638 | A:638 | 35.0 | 0.2 | -99.5 | 115.9 | 35.0 | 0.2 | 0.0 |
HOH |
8.763 |
N |
O |
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| ILE | B:638 | B:638 | 29.0 | 0.166 | -96.6 | 125.8 | NA | NA | NA | ||||||||||||||
| ILE | C:638 | E:638 | 34.0 | 0.194 | -105.1 | 119.8 | NA | NA | NA | ||||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | ILE | A:638 | A:638 | 29.0 | 0.166 | -97.2 | 113.2 | 29.0 | 0.166 | 0.0 | |||||||
| ILE | B:638 | B:638 | 32.0 | 0.183 | -98.5 | 114.6 | NA | NA | NA | ||||||||||||||
| ILE | C:638 | C:638 | 32.0 | 0.183 | -100.2 | 123.6 | NA | NA | NA | ||||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | ILE | A:638 | A:638 | 29.0 | 0.166 | -86.7 | 124.5 | 29.0 | 0.166 | 0.0 | |||||||
| ILE | B:638 | B:638 | 35.0 | 0.2 | -90.2 | 123.1 | NA | NA | NA | ||||||||||||||
| ILE | C:638 | C:638 | 26.0 | 0.149 | -89.6 | 124.3 | NA | NA | NA | ||||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ILE | A:645 | A:638 | 23.0 | 0.131 | -105.3 | 113.4 | 23.0 | 0.131 | 0.0 | |||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ILE | A:645 | A:638 | 20.0 | 0.114 | E | -116.2 | 112.0 | 20.0 | 0.114 | 0.0 | ||||||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ILE | A:645 | A:638 | 26.0 | 0.149 | E | -89.3 | 124.6 | 26.0 | 0.149 | 0.0 | ||||||
| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | ILE | A:638 | A:638 | 27.0 | 0.154 | E | -86.3 | 103.4 | 27.0 | 0.154 | 0.0 | ||||||
| ILE | B:638 | B:638 | 27.0 | 0.154 | E | -87.0 | 105.1 | NA | NA | NA | |||||||||||||
| ILE | C:638 | C:638 | 27.0 | 0.154 | E | -87.3 | 105.8 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | ILE | A:638 | A:638 | 32.0 | 0.183 | -113.6 | 115.5 | 32.0 | 0.183 | 0.0 | |||||||
| ILE | B:638 | B:638 | 31.0 | 0.177 | -113.6 | 114.6 | NA | NA | NA | ||||||||||||||
| ILE | C:638 | C:638 | 31.0 | 0.177 | -113.8 | 113.8 | 31.0 | 0.177 | 0.0 |
HOH |
4.616 |
CG2 |
O |
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| ILE | D:638 | D:638 | 32.0 | 0.183 | -112.3 | 113.1 | NA | NA | NA | ||||||||||||||
| ILE | E:638 | E:638 | 31.0 | 0.177 | -114.2 | 115.2 | NA | NA | NA | ||||||||||||||
| ILE | F:638 | F:638 | 32.0 | 0.183 | -114.7 | 113.9 | NA | NA | NA | ||||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | ILE | A:638 | A:638 | 25.0 | 0.143 | E | -121.7 | 95.8 | 25.0 | 0.143 | 0.0 |
HOH |
2.826 |
O |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | ILE | A:638 | A:638 | 27.0 | 0.154 | -102.4 | 114.4 | ||