Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36759526 | . | C | A | CCDS13302.1:NM_004613.2:c.1882Ggc>Tgc_NP_004604.2:p.628G>C | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | GLY | A:628 | A:628 | 2.0 | 0.027 | T | 105.3 | -24.6 | 2.0 | 0.027 | 0.0 |
HOH |
7.845 |
N |
O |
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| GLY | B:628 | B:628 | 4.0 | 0.053 | T | 88.6 | -3.7 | NA | NA | NA | |||||||||||||
| GLY | C:628 | E:628 | 0.0 | 0.0 | T | 100.4 | -22.4 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | GLY | A:628 | A:628 | 3.0 | 0.04 | T | 92.0 | -20.5 | 3.0 | 0.04 | 0.0 | ||||||
| GLY | B:628 | B:628 | 4.0 | 0.053 | T | 92.1 | -20.5 | NA | NA | NA | |||||||||||||
| GLY | C:628 | C:628 | 4.0 | 0.053 | T | 92.3 | -20.0 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | GLY | A:628 | A:628 | 11.0 | 0.147 | T | 94.9 | -20.6 | 11.0 | 0.147 | 0.0 | ||||||
| GLY | B:628 | B:628 | 10.0 | 0.133 | T | 92.4 | -19.1 | NA | NA | NA | |||||||||||||
| GLY | C:628 | C:628 | 2.0 | 0.027 | T | 97.4 | -21.8 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:635 | A:628 | 31.0 | 0.413 | T | 108.8 | -18.0 | 31.0 | 0.413 | 0.0 | ||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:635 | A:628 | 14.0 | 0.187 | T | 104.1 | 3.8 | 14.0 | 0.187 | 0.0 | ||||||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:635 | A:628 | 18.0 | 0.24 | T | 95.3 | -6.9 | 18.0 | 0.24 | 0.0 | ||||||
| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | GLY | A:628 | A:628 | 6.0 | 0.08 | T | 128.0 | -26.0 | 6.0 | 0.08 | 0.0 | ||||||
| GLY | B:628 | B:628 | 6.0 | 0.08 | T | 127.7 | -26.5 | NA | NA | NA | |||||||||||||
| GLY | C:628 | C:628 | 5.0 | 0.067 | T | 127.8 | -27.1 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | GLY | A:628 | A:628 | 4.0 | 0.053 | T | 113.1 | -20.7 | 4.0 | 0.053 | 0.0 |
HOH |
5.485 |
N |
O |
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| GLY | B:628 | B:628 | 4.0 | 0.053 | T | 114.5 | -23.9 | NA | NA | NA | |||||||||||||
| GLY | C:628 | C:628 | 3.0 | 0.04 | T | 117.7 | -24.7 | 3.0 | 0.04 | 0.0 |
HOH |
8.773 |
N |
O |
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| GLY | D:628 | D:628 | 3.0 | 0.04 | T | 114.6 | -22.8 | NA | NA | NA | |||||||||||||
| GLY | E:628 | E:628 | 4.0 | 0.053 | T | 113.6 | -21.9 | NA | NA | NA | |||||||||||||
| GLY | F:628 | F:628 | 3.0 | 0.04 | T | 114.8 | -21.6 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | GLY | A:628 | A:628 | 34.0 | 0.453 | T | 95.0 | -11.2 | 34.0 | 0.453 | 0.0 |
HOH |
5.526 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | GLY | A:628 | A:628 | 1.0 | 0.013 | T | 71.3 | 0.7 | |