Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36760809 | . | G | A | CCDS13302.1:NM_004613.2:c.1709cCa>cTa_NP_004604.2:p.570P>L | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | PRO | A:570 | A:570 | 56.0 | 0.386 | T | -77.5 | -35.0 | 56.0 | 0.386 | 0.0 | ||||||
| PRO | B:570 | B:570 | 71.0 | 0.49 | T | -67.4 | -32.2 | NA | NA | NA | |||||||||||||
| PRO | C:570 | E:570 | 54.0 | 0.372 | T | -68.4 | -47.3 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | PRO | A:570 | A:570 | 62.0 | 0.428 | T | -68.9 | -36.2 | 62.0 | 0.428 | 0.0 | ||||||
| PRO | B:570 | B:570 | 73.0 | 0.503 | T | -68.2 | -34.0 | NA | NA | NA | |||||||||||||
| PRO | C:570 | C:570 | 75.0 | 0.517 | T | -69.0 | -35.2 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | PRO | A:570 | A:570 | 56.0 | 0.386 | T | -83.3 | -32.6 | 56.0 | 0.386 | 0.0 | ||||||
| PRO | B:570 | B:570 | 31.0 | 0.214 | T | -73.5 | 147.0 | NA | NA | NA | |||||||||||||
| PRO | C:570 | C:570 | 75.0 | 0.517 | T | -65.0 | -39.4 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:577 | A:570 | 48.0 | 0.331 | T | -71.9 | -26.1 | 48.0 | 0.331 | 0.0 | ||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:577 | A:570 | 32.0 | 0.221 | T | -62.5 | -38.6 | 32.0 | 0.221 | 0.0 |
HOH |
5.729 |
O |
O |
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| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:577 | A:570 | 23.0 | 0.159 | T | -74.8 | -5.7 | 23.0 | 0.159 | 0.0 | ||||||
| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | PRO | A:570 | A:570 | 60.0 | 0.414 | T | -45.2 | -58.4 | 60.0 | 0.414 | 0.0 | ||||||
| PRO | B:570 | B:570 | 59.0 | 0.407 | T | -45.6 | -58.6 | NA | NA | NA | |||||||||||||
| PRO | C:570 | C:570 | 60.0 | 0.414 | T | -45.5 | -58.7 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | PRO | A:570 | A:570 | 64.0 | 0.441 | T | -58.8 | -32.8 | 64.0 | 0.441 | 0.0 |
HOH |
3.643 |
CG |
O |
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| PRO | B:570 | B:570 | 64.0 | 0.441 | T | -58.3 | -32.9 | NA | NA | NA | |||||||||||||
| PRO | C:570 | C:570 | 65.0 | 0.448 | T | -59.9 | -32.9 | 65.0 | 0.448 | 0.0 |
HOH |
5.200 |
CB |
O |
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| PRO | D:570 | D:570 | 65.0 | 0.448 | T | -59.8 | -34.5 | NA | NA | NA | |||||||||||||
| PRO | E:570 | E:570 | 66.0 | 0.455 | T | -59.8 | -30.6 | NA | NA | NA | |||||||||||||
| PRO | F:570 | F:570 | 64.0 | 0.441 | T | -58.1 | -33.4 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | PRO | A:570 | A:570 | 21.0 | 0.145 | T | -66.4 | -23.3 | 21.0 | 0.145 | 0.0 |
HOH |
3.593 |
CB |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | PRO | A:570 | A:570 | 47.0 | 0.324 | T | -65.9 | -22.1 | |