Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36766524 | . | G | A | CCDS13302.1:NM_004613.2:c.1606Cct>Tct_NP_004604.2:p.536P>S | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | PRO | A:536 | A:536 | 46.0 | 0.317 | T | -66.7 | 152.6 | 46.0 | 0.317 | 0.0 |
HOH |
6.097 |
N |
O |
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| PRO | B:536 | B:536 | 52.0 | 0.359 | T | -60.0 | 143.5 | NA | NA | NA | |||||||||||||
| PRO | C:536 | E:536 | 47.0 | 0.324 | T | -64.3 | 139.7 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | PRO | A:536 | A:536 | 52.0 | 0.359 | T | -66.1 | 138.1 | 52.0 | 0.359 | 0.0 | ||||||
| PRO | B:536 | B:536 | 47.0 | 0.324 | T | -63.5 | 136.4 | NA | NA | NA | |||||||||||||
| PRO | C:536 | C:536 | 51.0 | 0.352 | T | -65.3 | 136.5 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | PRO | A:536 | A:536 | 47.0 | 0.324 | T | -68.1 | 146.2 | 22.0 | 0.152 | 0.172 |
A:P21980:0.172 |
CA |
7.318 |
O |
CA |
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| PRO | B:536 | B:536 | 47.0 | 0.324 | T | -67.7 | 145.3 | NA | NA | NA | |||||||||||||
| PRO | C:536 | C:536 | 49.0 | 0.338 | T | -66.4 | 145.7 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:543 | A:536 | 48.0 | 0.331 | T | -52.5 | 132.2 | 48.0 | 0.331 | 0.0 | ||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:543 | A:536 | 48.0 | 0.331 | T | -62.9 | 150.6 | 48.0 | 0.331 | 0.0 |
HOH |
9.785 |
N |
O |
||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:543 | A:536 | 49.0 | 0.338 | T | -58.3 | 149.5 | 49.0 | 0.338 | 0.0 |
HOH |
9.361 |
N |
O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | PRO | A:536 | A:536 | 36.0 | 0.248 | T | -52.4 | 148.5 | 36.0 | 0.248 | 0.0 | ||||||
| PRO | B:536 | B:536 | 38.0 | 0.262 | T | -53.3 | 149.2 | NA | NA | NA | |||||||||||||
| PRO | C:536 | C:536 | 37.0 | 0.255 | T | -54.1 | 148.6 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | PRO | A:536 | A:536 | 42.0 | 0.29 | T | -62.4 | 143.9 | 21.0 | 0.145 | 0.145 |
C:P21980:0.145 |
HOH |
6.023 |
C |
O |
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| PRO | B:536 | B:536 | 41.0 | 0.283 | T | -64.1 | 143.6 | NA | NA | NA | |||||||||||||
| PRO | C:536 | C:536 | 43.0 | 0.297 | T | -63.8 | 140.6 | 22.0 | 0.152 | 0.145 |
A:P21980:0.145 |
HOH |
7.465 |
O |
O |
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| PRO | D:536 | D:536 | 42.0 | 0.29 | T | -66.8 | 141.5 | NA | NA | NA | |||||||||||||
| PRO | E:536 | E:536 | 42.0 | 0.29 | T | -65.0 | 142.4 | NA | NA | NA | |||||||||||||
| PRO | F:536 | F:536 | 43.0 | 0.297 | T | -65.7 | 141.6 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | PRO | A:536 | A:536 | 42.0 | 0.29 | T | -44.3 | 145.9 | 42.0 | 0.29 | 0.0 |
HOH |
9.736 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | PRO | A:536 | A:536 | 53.0 | 0.366 | T | -52.3 | 138.4 | |