wupsivus

Variant

Genome	Chromosome	Position	VCF ID	Ref	Alt	mRNA Change	mRNA Info
GRCh37	chr20	36766649	.	T	A	CCDS13302.1:NM_004613.2:c.1481cAc>cTc_NP_004604.2:p.494H>L	Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.

pdb_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

alphafold_id	:
label_asym_id	:
label_seq_id	:
label_comp_id	:
auth_asym_id	:
auth_seq_id	:

PDB

Entity							Residue			Monomer					BioUnit				Ligand				View
PDB	Entity	Uniprot	Identity	Evalue	ExpMethod	Date	Name	Label	Auth	ASA	rASA	SS	φ	ψ	ASA	rASA	ΔASA	Interaction	Name	Distance	Atom(p)	Atom(l)	View
4pyg	1	P21980	100.0	0.0	X-RAY	2015-02-11	HIS	A:494	A:494	20.0	0.103	E	-112.8	108.3	20.0	0.103	0.0		GTP HOH	6.864 9.783	CB ND1	O3G O
							HIS	B:494	B:494	20.0	0.103	E	-97.5	128.0	NA	NA	NA
							HIS	C:494	E:494	25.0	0.128	E	-85.7	116.3	NA	NA	NA
6a8p	1	P21980	100.0	0.0	X-RAY	2018-09-26	HIS	A:494	A:494	20.0	0.103	E	-105.4	118.9	20.0	0.103	0.0		GTP	6.341	CD2	O2G
							HIS	B:494	B:494	19.0	0.097	E	-105.9	120.0	NA	NA	NA
							HIS	C:494	C:494	21.0	0.108	E	-105.3	120.2	NA	NA	NA
6kzb	1	P21980	100.0	0.0	X-RAY	2020-12-09	HIS	A:494	A:494	40.0	0.205	E	-98.7	119.6	14.0	0.072	0.133	A:P21980:0.133	CA GDP CA GDP	8.520 6.541 8.099 8.775	NE2 CB CE1 CE1	CA O1B CA O2B
							HIS	B:494	B:494	26.0	0.133	E	-96.9	120.0	NA	NA	NA
							HIS	C:494	C:494	30.0	0.154	E	-97.9	118.9	NA	NA	NA
3s3j	1	P21980	100.0	0.0	X-RAY	2012-06-06	HIS	A:501	A:494	13.0	0.067	E	-100.3	110.1	13.0	0.067	0.0		SO4	7.728	CB	O2
3s3p	1	P21980	100.0	0.0	X-RAY	2012-06-06	HIS	A:501	A:494	46.0	0.236	E	-94.9	106.1	46.0	0.236	0.0		SO4	7.922	CB	O4
3s3s	1	P21980	100.0	0.0	X-RAY	2012-06-06	HIS	A:501	A:494	16.0	0.082	E	-87.9	115.9	16.0	0.082	0.0		SO4	7.781	CB	O4
3ly6	1	P21980	99.85	0.0	X-RAY	2010-08-18	HIS	A:494	A:494	22.0	0.113	E	-94.1	110.2	22.0	0.113	0.0		ATP	6.407	CG	O3G
							HIS	B:494	B:494	23.0	0.118	E	-93.6	109.6	NA	NA	NA
							HIS	C:494	C:494	22.0	0.113	E	-93.8	110.9	NA	NA	NA
1kv3	1	P21980	99.27	0.0	X-RAY	2002-03-13	HIS	A:494	A:494	21.0	0.108	E	-108.5	112.0	3.0	0.015	0.093	C:P21980:0.092	GDP HOH	7.295 5.037	CB ND1	O3B O
							HIS	B:494	B:494	21.0	0.108	E	-107.3	110.2	NA	NA	NA
							HIS	C:494	C:494	20.0	0.103	E	-106.1	112.2	4.0	0.021	0.082	A:P21980:0.082	GDP HOH	7.356 3.381	CB ND1	O3B O
							HIS	D:494	D:494	21.0	0.108	E	-104.1	108.9	NA	NA	NA
							HIS	E:494	E:494	21.0	0.108	E	-105.2	110.2	NA	NA	NA
							HIS	F:494	F:494	19.0	0.097	E	-111.1	112.2	NA	NA	NA
2q3z	1	P21980	99.27	0.0	X-RAY	2007-10-23	HIS	A:494	A:494	12.0	0.062	E	-95.6	102.7	12.0	0.062	0.0		SO4 HOH	8.020 7.539	CB N	O3 O

AlphaFold DB

Entity					Residue			Monomer					View
ID	Entity	Uniprot	Identity	Evalue	Name	Label	Auth	ASA	rASA	SS	φ	ψ	View
af-p21980-f1	1	P21980	100.0	0.0	HIS	A:494	A:494	23.0	0.118	E	-94.2	118.6

wupsivus
	HOME ABOUT EXAMPLE HELP