Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36767850 | . | G | A | CCDS13302.1:NM_004613.2:c.1306Cgg>Tgg_NP_004604.2:p.436R>W | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | ARG | A:436 | A:436 | 82.0 | 0.364 | E | -78.3 | 128.6 | 82.0 | 0.364 | 0.0 |
HOH |
7.190 |
NH1 |
O |
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| ARG | B:436 | B:436 | 87.0 | 0.387 | E | -78.3 | 137.3 | NA | NA | NA | |||||||||||||
| ARG | C:436 | E:436 | 86.0 | 0.382 | E | -76.6 | 145.9 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | ARG | A:436 | A:436 | 86.0 | 0.382 | E | -85.8 | 137.7 | 86.0 | 0.382 | 0.0 | ||||||
| ARG | B:436 | B:436 | 93.0 | 0.413 | E | -85.6 | 138.3 | NA | NA | NA | |||||||||||||
| ARG | C:436 | C:436 | 81.0 | 0.36 | E | -85.8 | 138.9 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | ARG | A:436 | A:436 | 75.0 | 0.333 | E | -73.8 | 136.6 | 75.0 | 0.333 | 0.0 |
CA |
9.892 |
C |
CA |
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| ARG | B:436 | B:436 | 78.0 | 0.347 | E | -73.8 | 136.2 | NA | NA | NA | |||||||||||||
| ARG | C:436 | C:436 | 74.0 | 0.329 | E | -74.4 | 136.2 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:443 | A:436 | 81.0 | 0.36 | E | -100.0 | 135.0 | 81.0 | 0.36 | 0.0 |
GOL HOH |
9.221 3.127 |
N NH1 |
C3 O |
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| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:443 | A:436 | 85.0 | 0.378 | E | -84.1 | 135.8 | 85.0 | 0.378 | 0.0 |
HOH |
2.863 |
NH1 |
O |
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| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:443 | A:436 | 95.0 | 0.422 | E | -94.9 | 132.5 | 95.0 | 0.422 | 0.0 |
HOH |
2.559 |
NH1 |
O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | ARG | A:436 | A:436 | 83.0 | 0.369 | E | -96.3 | 143.9 | 83.0 | 0.369 | 0.0 | ||||||
| ARG | B:436 | B:436 | 82.0 | 0.364 | E | -97.8 | 143.9 | NA | NA | NA | |||||||||||||
| ARG | C:436 | C:436 | 81.0 | 0.36 | E | -97.5 | 143.4 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | ARG | A:436 | A:436 | 84.0 | 0.373 | E | -82.2 | 133.2 | 84.0 | 0.373 | 0.0 |
HOH |
2.899 |
NH1 |
O |
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| ARG | B:436 | B:436 | 84.0 | 0.373 | E | -83.3 | 137.0 | NA | NA | NA | |||||||||||||
| ARG | C:436 | C:436 | 84.0 | 0.373 | E | -83.9 | 137.8 | 84.0 | 0.373 | 0.0 |
HOH |
2.829 |
NH1 |
O |
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| ARG | D:436 | D:436 | 84.0 | 0.373 | E | -89.5 | 135.5 | NA | NA | NA | |||||||||||||
| ARG | E:436 | E:436 | 84.0 | 0.373 | E | -81.4 | 134.1 | NA | NA | NA | |||||||||||||
| ARG | F:436 | F:436 | 82.0 | 0.364 | E | -86.0 | 134.5 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | ARG | A:436 | A:436 | 99.0 | 0.44 | E | -98.7 | 134.9 | 99.0 | 0.44 | 0.0 |
HOH |
2.956 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | ARG | A:436 | A:436 | 88.0 | 0.391 | E | -76.8 | 124.8 | |