Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36767891 . A C CCDS13302.1:NM_004613.2:c.1265gTt>gGt_NP_004604.2:p.422V>G Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 VAL A:422 A:422 7.0 0.045 S -68.0 138.0 7.0 0.045 0.0
VAL B:422 B:422 11.0 0.071 S -78.0 130.0 NA NA NA
VAL C:422 E:422 14.0 0.09 S -76.1 137.3 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 VAL A:422 A:422 6.0 0.039 S -75.8 152.0 6.0 0.039 0.0
VAL B:422 B:422 11.0 0.071 S -77.7 145.9 NA NA NA
VAL C:422 C:422 10.0 0.065 S -76.4 145.3 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 VAL A:422 A:422 11.0 0.071 S -77.8 152.6 11.0 0.071 0.0
VAL B:422 B:422 7.0 0.045 S -80.1 148.9 NA NA NA
VAL C:422 C:422 9.0 0.058 S -71.7 157.5 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 VAL A:429 A:422 8.0 0.052 E -114.3 140.2 8.0 0.052 0.0 HOH
 3.021
 O
 O
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 VAL A:429 A:422 10.0 0.065 E -99.6 144.2 10.0 0.065 0.0 HOH
 8.757
 CG2
 O
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 VAL A:429 A:422 11.0 0.071 E -116.6 135.7 11.0 0.071 0.0 HOH
 3.019
 O
 O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 VAL A:422 A:422 10.0 0.065 S -85.4 124.8 10.0 0.065 0.0
VAL B:422 B:422 11.0 0.071 S -85.6 124.1 NA NA NA
VAL C:422 C:422 10.0 0.065 S -86.4 125.3 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 VAL A:422 A:422 10.0 0.065 S -72.6 143.9 10.0 0.065 0.0 HOH
 5.215
 CB
 O
VAL B:422 B:422 10.0 0.065 S -72.3 139.5 NA NA NA
VAL C:422 C:422 11.0 0.071 S -69.4 142.1 11.0 0.071 0.0 HOH
 5.609
 O
 O
VAL D:422 D:422 10.0 0.065 S -71.7 140.2 NA NA NA
VAL E:422 E:422 11.0 0.071 S -74.6 140.2 NA NA NA
VAL F:422 F:422 11.0 0.071 S -71.8 141.9 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 VAL A:422 A:422 9.0 0.058 E -111.3 143.6 9.0 0.058 0.0 HOH
 2.787
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 VAL A:422 A:422 5.0 0.032 S -77.5 150.1