Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36767954 | . | A | C | CCDS13302.1:NM_004613.2:c.1202gTg>gGg_NP_004604.2:p.401V>G | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | VAL | A:401 | A:401 | 29.0 | 0.187 | E | -133.1 | 128.0 | 29.0 | 0.187 | 0.0 | ||||||
| VAL | B:401 | B:401 | 20.0 | 0.129 | E | -119.0 | 141.1 | NA | NA | NA | |||||||||||||
| VAL | C:401 | E:401 | 25.0 | 0.161 | E | -100.2 | 130.0 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | VAL | A:401 | A:401 | 37.0 | 0.239 | E | -116.0 | 130.9 | 37.0 | 0.239 | 0.0 | ||||||
| VAL | B:401 | B:401 | 37.0 | 0.239 | E | -117.5 | 130.5 | NA | NA | NA | |||||||||||||
| VAL | C:401 | C:401 | 35.0 | 0.226 | E | -118.1 | 129.6 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | VAL | A:401 | A:401 | 28.0 | 0.181 | E | -112.8 | 128.9 | 28.0 | 0.181 | 0.0 | ||||||
| VAL | B:401 | B:401 | 26.0 | 0.168 | E | -115.7 | 131.1 | NA | NA | NA | |||||||||||||
| VAL | C:401 | C:401 | 18.0 | 0.116 | E | -117.7 | 132.4 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:408 | A:401 | 7.0 | 0.045 | E | -115.8 | 121.2 | 7.0 | 0.045 | 0.0 |
HOH |
5.765 |
CG2 |
O |
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| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:408 | A:401 | 7.0 | 0.045 | E | -115.3 | 119.4 | 7.0 | 0.045 | 0.0 | ||||||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | VAL | A:408 | A:401 | 7.0 | 0.045 | E | -119.3 | 117.8 | 7.0 | 0.045 | 0.0 |
HOH |
2.901 |
N |
O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | VAL | A:401 | A:401 | 24.0 | 0.155 | E | -131.3 | 139.5 | 24.0 | 0.155 | 0.0 | ||||||
| VAL | B:401 | B:401 | 24.0 | 0.155 | E | -129.9 | 140.9 | NA | NA | NA | |||||||||||||
| VAL | C:401 | C:401 | 25.0 | 0.161 | E | -132.1 | 141.1 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | VAL | A:401 | A:401 | 28.0 | 0.181 | E | -116.1 | 137.4 | 28.0 | 0.181 | 0.0 |
HOH |
4.134 |
CG1 |
O |
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| VAL | B:401 | B:401 | 25.0 | 0.161 | E | -111.7 | 140.4 | NA | NA | NA | |||||||||||||
| VAL | C:401 | C:401 | 26.0 | 0.168 | E | -113.3 | 136.8 | 26.0 | 0.168 | 0.0 |
HOH |
4.920 |
CG1 |
O |
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| VAL | D:401 | D:401 | 26.0 | 0.168 | E | -113.5 | 142.1 | NA | NA | NA | |||||||||||||
| VAL | E:401 | E:401 | 25.0 | 0.161 | E | -111.8 | 140.2 | NA | NA | NA | |||||||||||||
| VAL | F:401 | F:401 | 24.0 | 0.155 | E | -114.7 | 138.0 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | VAL | A:401 | A:401 | 8.0 | 0.052 | E | -125.9 | 124.7 | 8.0 | 0.052 | 0.0 |
HOH |
7.440 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | VAL | A:401 | A:401 | 17.0 | 0.11 | E | -117.9 | 131.4 | |